New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 916477 = | 28 (0.410) | 4 (0.060) | 4/144 | 3.9 | 13.3% | coding (675/1947 nt) | macB | macrolide ABC transporter ATP‑binding protein/permease MacB |
? | NZ_CP009273 | 916512 = | 27 (0.440) | coding (710/1947 nt) | macB | macrolide ABC transporter ATP‑binding protein/permease MacB | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TCGTTAAAACCGCTGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/916569‑916477 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggaCGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGC > NZ_CP009273/916512‑916558 TCGTTAAAACCGCTGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCG > 1:1801522/1‑90 CGCTAACAAACTGCCCCCAGCCAGCCCCCGTGTTGACAACAGGTCCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACC < 1:1382831/90‑1 TGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACCTGT < 2:1704274/90‑1 AGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTAACTTTTTCAATG > 1:1477894/1‑55 AGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTAACTTTTTCAATG < 2:1477894/55‑1 GTGTTGACAACAGGTCCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGC < 1:332362/90‑1 gGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGC < 2:1714103/89‑1 TCGTTAAAACCGCTGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/916569‑916477 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggaCGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGC > NZ_CP009273/916512‑916558 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |