New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 916477 =28 (0.410)4 (0.060) 4/144 3.9 13.3% coding (675/1947 nt) macB macrolide ABC transporter ATP‑binding protein/permease MacB
?NZ_CP009273 916512 = 27 (0.440)coding (710/1947 nt) macB macrolide ABC transporter ATP‑binding protein/permease MacB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGTTAAAACCGCTGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/916569‑916477
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggaCGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGC  >  NZ_CP009273/916512‑916558
                                                                                                                                            
TCGTTAAAACCGCTGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCG                                                    >  1:1801522/1‑90
          CGCTAACAAACTGCCCCCAGCCAGCCCCCGTGTTGACAACAGGTCCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACC                                          <  1:1382831/90‑1
             TGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACCTGT                                       <  2:1704274/90‑1
                                AGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTAACTTTTTCAATG                                                       >  1:1477894/1‑55
                                AGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTAACTTTTTCAATG                                                       <  2:1477894/55‑1
                                       GTGTTGACAACAGGTCCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGC             <  1:332362/90‑1
                                                  gGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGC  <  2:1714103/89‑1
                                                                                                                                            
TCGTTAAAACCGCTGACAAACTGCCGCCAGCCAGACACCGTGTTGACAACAGGTTCCGTCCCGCCAGTAACATTCACTTTTTCAATGGCGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP009273/916569‑916477
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgggaCGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGC  >  NZ_CP009273/916512‑916558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.