| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 916477 = | 28 (0.410) | 4 (0.060) | 4/144 | 3.9 | 13.3% | coding (675/1947 nt) | macB | macrolide ABC transporter ATP‑binding protein/permease MacB |
| ? | NZ_CP009273 | 916512 = | 27 (0.440) | coding (710/1947 nt) | macB | macrolide ABC transporter ATP‑binding protein/permease MacB | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAG > NZ_CP009273/916390‑916557 | ggTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAAtcctac < 2:1519223/90‑3 (MQ=255) gATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGc > 2:1461549/1‑90 (MQ=255) aTTATCGCCCCCCACGACCCGCAGGCCGCTGCTCGGGCCGGGGGGGTGATAAAAATCCGCGACGGCGAAATTGTGCGCAACCCCCCCGcc < 1:315798/90‑1 (MQ=255) cGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGa > 2:1559416/1‑90 (MQ=255) gTCACCCCCGACCCGCAGGTCGCTGCTCGGGCCGAGCGGGTGATCAAAATTCGCGACGGCGAAATTGTGCGCAATCCCCCCGCCATTGaa < 1:1533226/90‑1 (MQ=255) cccccccCGACCCGCGGGTCGCTGCCCGGGCCGAGGGGGTGATCGAAATTCGCGACGGCAAAATTGTGCGCAATCCTCCCGCCATTGaaa < 1:1063942/87‑1 (MQ=255) aCGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGa > 1:2114196/1‑90 (MQ=255) aCGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGa > 1:745596/1‑90 (MQ=255) gATCCGCAGGCCGCTGCCCAGGCCGGGCGGGTAATCAAAATTCGCGACGGGAAAATTGTGCGCAACCCTCCCGCCATTGAAAAAGTGAAt < 1:830262/90‑1 (MQ=255) ggTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTgg > 1:329328/1‑90 (MQ=255) gTCGCTCCTCAGGCCGGGCGGGTGAAAAAATTGCGGGGCGGCAAATTTGTGCGCAACCCCCCCGCCATTGAAAAAGTGAATGTTACTGGc < 1:1559416/90‑1 (MQ=255) ccGCTGCCCAGGCCGGGGGGGTGATAAAAATTCGCGGGGGCAAATTGGGGCCCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCg < 1:749023/89‑1 (MQ=255) cgatgctCAGGCCGAGCGGGTGATCGAAATTCGCGACGACGAAATTGTGCGCAATCCTCCTGCCATTGaa < 2:350884/67‑1 (MQ=255) cgatgctCAGGCCGAGCGGGTGATCGAAATTCGCGACGACGAAATTGTGCGCAATCCTCCTGCCATTGaa > 1:350884/4‑70 (MQ=255) cGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCgg > 2:749023/1‑90 (MQ=255) cGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCgg > 2:1345132/1‑90 (MQ=255) ctgctCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCgggg > 1:1684815/1‑89 (MQ=255) ggCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGGAcc > 1:647627/1‑90 (MQ=255) ccGAGCGGGCGATCAAACTGCGGGAGGGGAAACTGGGGCGCACCCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtg < 1:608596/90‑1 (MQ=255) gAGGGGGTGATCAAAATTCGCGACGGCGAATTTGTGCGCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgtt < 2:2114196/90‑1 (MQ=255) gAGCGGGTAATCAAAATGCGCGCGGGAAAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGATGGAACCtgtt < 2:745596/90‑1 (MQ=255) aGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtggtg > 2:329141/1‑90 (MQ=255) gggggTGATAAAAATTCGGGAGGGAGAATTTGTGCCCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgttgt < 1:1345132/88‑1 (MQ=255) gTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAac > 2:1252444/1‑90 (MQ=255) gATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAacac < 2:1684815/90‑1 (MQ=255) gcgACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTctggct > 2:1335991/1‑90 (MQ=255) aCGGCAAAATTGTGCCCAATCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCtggctggc < 2:329328/90‑1 (MQ=255) gcgcAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGGCGTTTTTCAg > 1:1806671/1‑90 (MQ=255) | GGTGATTATCGTCACCCACGATCCGCAGGTCGCTGCTCAGGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAG > NZ_CP009273/916390‑916557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |