New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 916477 =28 (0.410)4 (0.060) 4/144 3.9 13.3% coding (675/1947 nt) macB macrolide ABC transporter ATP‑binding protein/permease MacB
?NZ_CP009273 916512 = 27 (0.440)coding (710/1947 nt) macB macrolide ABC transporter ATP‑binding protein/permease MacB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGG  >  NZ_CP009273/916429‑916592
                                                                                   |                                                                                
ggCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGGAcc                                                                            >  1:647627/1‑90 (MQ=255)
  ccGAGCGGGCGATCAAACTGCGGGAGGGGAAACTGGGGCGCACCCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtg                                                                          <  1:608596/90‑1 (MQ=255)
    gAGGGGGTGATCAAAATTCGCGACGGCGAATTTGTGCGCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgtt                                                                        <  2:2114196/90‑1 (MQ=255)
    gAGCGGGTAATCAAAATGCGCGCGGGAAAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGATGGAACCtgtt                                                                        <  2:745596/90‑1 (MQ=255)
     aGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtggtg                                                                       >  2:329141/1‑90 (MQ=255)
      gggggTGATAAAAATTCGGGAGGGAGAATTTGTGCCCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgttgt                                                                      <  1:1345132/88‑1 (MQ=255)
          gTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAac                                                                  >  2:1252444/1‑90 (MQ=255)
            gATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAacac                                                                <  2:1684815/90‑1 (MQ=255)
                       gcgACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTctggct                                                     >  2:1335991/1‑90 (MQ=255)
                          aCGGCAAAATTGTGCCCAATCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCtggctggc                                                  <  2:329328/90‑1 (MQ=255)
                                       gcgcAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGGCGTTTTTCAg                                     >  1:1806671/1‑90 (MQ=255)
                                                   cGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGa                         <  1:1801522/90‑1 (MQ=255)
                                                      cATTGAAAAAGTTAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTct                                                         <  1:1477894/55‑1 (MQ=255)
                                                      cATTGAAAAAGTTAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTct                                                         >  2:1477894/1‑55 (MQ=255)
                                                      cATTGAAAAAGTGAATGTTAATGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGGTGGCGGGGGGTTGTTAGCGGGTTTTAAGAggg                      >  1:924482/1‑89 (MQ=255)
                                                        ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGa                         <  1:669389/85‑1 (MQ=255)
                                                        ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGa                         >  2:669389/1‑85 (MQ=255)
                                                        ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGgcgc                    <  1:1704274/90‑1 (MQ=255)
                                                        ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGTTTTTCAGCGGGTTTAAAGAGgcgc                    >  2:2109047/1‑90 (MQ=255)
                                                        ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGgcgc                    >  2:1761811/1‑90 (MQ=255)
                                                          gAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTg                  >  2:764660/1‑90 (MQ=255)
                                                                  gAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGTTTGTCAGCGGGTTTTACGAGGCGCTGACGatggg          >  1:833600/1‑89 (MQ=255)
                                                                       ttACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGatggcatggc     <  2:1872873/90‑1 (MQ=255)
                                                                        tACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGAGGTTTTAACGAGGCGCTGACGATGGCATggcg    >  2:1887033/1‑90 (MQ=255)
                                                                          cTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGat             >  2:295193/1‑79 (MQ=255)
                                                                          cTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGat             <  1:295193/79‑1 (MQ=255)
                                                                          cTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGGAGTTTGTCAGCGGGTTTTACGAGGGGCTGACGATGGCCTggcggg  >  1:2070898/1‑90 (MQ=255)
                                                                                   |                                                                                
GGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGG  >  NZ_CP009273/916429‑916592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.