New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 916477 = | 28 (0.410) | 4 (0.060) | 4/144 | 3.9 | 13.3% | coding (675/1947 nt) | macB | macrolide ABC transporter ATP‑binding protein/permease MacB |
? | NZ_CP009273 | 916512 = | 27 (0.440) | coding (710/1947 nt) | macB | macrolide ABC transporter ATP‑binding protein/permease MacB | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGG > NZ_CP009273/916429‑916592 | ggCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGGAcc > 1:647627/1‑90 (MQ=255) ccGAGCGGGCGATCAAACTGCGGGAGGGGAAACTGGGGCGCACCCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtg < 1:608596/90‑1 (MQ=255) gAGGGGGTGATCAAAATTCGCGACGGCGAATTTGTGCGCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgtt < 2:2114196/90‑1 (MQ=255) gAGCGGGTAATCAAAATGCGCGCGGGAAAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGATGGAACCtgtt < 2:745596/90‑1 (MQ=255) aGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtggtg > 2:329141/1‑90 (MQ=255) gggggTGATAAAAATTCGGGAGGGAGAATTTGTGCCCAACCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCtgttgt < 1:1345132/88‑1 (MQ=255) gTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAac > 2:1252444/1‑90 (MQ=255) gATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAacac < 2:1684815/90‑1 (MQ=255) gcgACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTctggct > 2:1335991/1‑90 (MQ=255) aCGGCAAAATTGTGCCCAATCCCCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCtggctggc < 2:329328/90‑1 (MQ=255) gcgcAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGGCGTTTTTCAg > 1:1806671/1‑90 (MQ=255) cGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGa < 1:1801522/90‑1 (MQ=255) cATTGAAAAAGTTAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTct < 1:1477894/55‑1 (MQ=255) cATTGAAAAAGTTAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTct > 2:1477894/1‑55 (MQ=255) cATTGAAAAAGTGAATGTTAATGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGGTGGCGGGGGGTTGTTAGCGGGTTTTAAGAggg > 1:924482/1‑89 (MQ=255) ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGa < 1:669389/85‑1 (MQ=255) ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGa > 2:669389/1‑85 (MQ=255) ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGgcgc < 1:1704274/90‑1 (MQ=255) ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGTTTTTCAGCGGGTTTAAAGAGgcgc > 2:2109047/1‑90 (MQ=255) ttGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGgcgc > 2:1761811/1‑90 (MQ=255) gAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTg > 2:764660/1‑90 (MQ=255) gAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGCAGTTTGTCAGCGGGTTTTACGAGGCGCTGACGatggg > 1:833600/1‑89 (MQ=255) ttACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGatggcatggc < 2:1872873/90‑1 (MQ=255) tACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGAGGTTTTAACGAGGCGCTGACGATGGCATggcg > 2:1887033/1‑90 (MQ=255) cTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGat > 2:295193/1‑79 (MQ=255) cTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGat < 1:295193/79‑1 (MQ=255) cTGGCGGGACGGAACCTGTTGTCAACACGGGGTCTGGCTGGCGGGAGTTTGTCAGCGGGTTTTACGAGGGGCTGACGATGGCCTggcggg > 1:2070898/1‑90 (MQ=255) | GGCCGAGCGGGTGATCGAAATTCGCGACGGCGAAATTGTGCGCAATCCTCCCGCCATTGAAAAAGTGAATGTTACTGGCGGGACGGAACCTGTTGTCAACACGGTGTCTGGCTGGCGGCAGTTTGTCAGCGGTTTTAACGAGGCGCTGACGATGGCATGGCGGG > NZ_CP009273/916429‑916592 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |