mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,360,464 | 0 | G | T | 58.3% | 6.2 / 15.7 | 12 | C353F (TGT→TTT) | arnB | UDP‑4‑amino‑4‑deoxy‑L‑arabinose aminotransferase |
| * | NZ_CP009273 | 4,058,958 | 0 | G | A | 56.2% | ‑1.2 / 14.5 | 16 | L57L (CTG→TTG) | yihO | MFS transporter |
| * | NZ_CP009273 | 3,406,260 | 0 | G | T | 55.6% | 4.1 / 11.4 | 9 | Q189K (CAA→AAA) | acrS | multidrug efflux transporter transcriptional repressor AcrS |
| * | NZ_CP009273 | 3,771,872 | 0 | A | C | 54.5% | 8.5 / 10.8 | 11 | T372P (ACC→CCC) | lldP | L‑lactate permease |
| * | NZ_CP009273 | 4,455,617 | 0 | C | A | 54.5% | 5.1 / 13.0 | 11 | L127F (TTG→TTT) | treB | PTS trehalose transporter subunit IIBC |
| * | NZ_CP009273 | 1,570,326 | 0 | T | C | 53.3% | 10.4 / 19.0 | 15 | G517G (GGA→GGG) | yddB | TonB‑dependent receptor plug domain‑containing protein |
| * | NZ_CP009273 | 4,538,749 | 0 | A | T | 53.3% | 9.2 / 18.2 | 15 | Y42F (TAT→TTT) | fimH | type 1 fimbria D‑mannose specific adhesin FimH |
| * | NZ_CP009273 | 3,659,062 | 0 | C | A | 52.9% | 4.8 / 21.2 | 17 | A37S (GCG→TCG) | gadX | acid resistance transcriptional activator GadX |
| * | NZ_CP009273 | 3,726,640 | 0 | T | A | 52.6% | 9.4 / 27.6 | 19 | N360K (AAT→AAA) | xylG | D‑xylose ABC transporter ATP‑binding protein |
| * | NZ_CP009273 | 520,722 | 0 | T | G | 46.7% | 1.8 / 10.2 | 15 | V669G (GTA→GGA) | rhsD | rhs element protein RhsD |
| * | NZ_CP009273 | 3,699,013 | 0 | T | G | 35.0% | 18.1 / 12.8 | 20 | P46P (CCA→CCC) | dppB | dipeptide ABC transporter permease DppB |