BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 278223	179 (1.520)	11 (0.100)	8/154	4.0	5.9%	coding (235/909 nt)	yagE	2‑keto‑3‑deoxygluconate aldolase
*	?	NZ_CP009273	= 278229	191 (1.790)	11 (0.100)	8/154	4.0	5.9%	coding (241/909 nt)	yagE	2‑keto‑3‑deoxygluconate aldolase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 189 total aligned reads displayed.

GCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATC  >  NZ_CP009273/278134‑278312

gCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGc                                                                                           >  2:968915/1‑90 (MQ=255)

gCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGc                                                                                           >  1:2972981/1‑90 (MQ=255)

gCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGc                                                                                           <  1:1004756/90‑1 (MQ=255)

gCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGc                                                                                           <  2:3154488/90‑1 (MQ=255)

gCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGc                                                                                           >  2:2155205/1‑90 (MQ=255)

gCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGc                                                                                           >  2:2216334/1‑90 (MQ=255)

 cGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCt                                                                                          >  2:858003/1‑90 (MQ=255)

     ggCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATc                                                                                      <  2:1571391/90‑1 (MQ=255)

     ggCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTAGCGATCATGTCGATCGTCGCGTGCCGGTGCGGATc                                                                                      >  2:1988625/1‑90 (MQ=255)

          gTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCAc                                                                                 <  2:3036042/90‑1 (MQ=255)

          gTTCTCCCAGCTCGGCGCCGAAGAGCGAAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCAc                                                                                 <  2:1519783/90‑1 (MQ=255)

            tctcCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGACCGTCGCGTGCCGGTGCTGATCGGCACcg                                                                               >  2:3226685/1‑90 (MQ=255)

             ctcCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACcgg                                                                              >  1:3366073/1‑90 (MQ=255)

               cccAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACcggcg                                                                            <  2:1058675/90‑1 (MQ=255)

                ccAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACcggcgg                                                                           <  2:2472788/90‑1 (MQ=255)

                   gCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTg                                                                                         <  1:2303221/73‑1 (MQ=255)

                    cTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCAcc                                                                       >  1:3318297/1‑90 (MQ=255)

                    cTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCAcc                                                                       >  1:2815727/1‑90 (MQ=255)

                     tCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCa                                                                      <  1:786735/90‑1 (MQ=255)

                      cGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCaa                                                                     >  2:3223564/1‑90 (MQ=255)

                       ggCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAAc                                                                    >  2:2834706/1‑90 (MQ=255)

                        gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACg                                                                   >  2:1957872/1‑90 (MQ=255)

                        gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACg                                                                   <  1:3197895/90‑1 (MQ=255)

                         cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTTCTGATCGGCACCGGCGGCACCAACGc                                                                  <  2:2916391/90‑1 (MQ=255)

                         cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGc                                                                  >  1:524307/1‑90 (MQ=255)

                         cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGc                                                                  >  2:1470180/1‑90 (MQ=255)

                         cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGc                                                                  <  2:2101732/90‑1 (MQ=255)

                                gagCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGaa                                                           <  2:2715721/90‑1 (MQ=255)

                                gagCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGaa                                                           <  2:2330081/90‑1 (MQ=255)

                                  gCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAAc                                                         >  2:2464250/1‑90 (MQ=255)

                                    gTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCa                                                       >  1:1363469/1‑90 (MQ=255)

                                     tAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCAt                                                      >  1:1869874/1‑90 (MQ=255)

                                      aaaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATc                                                     <  2:48511/90‑1 (MQ=255)

                                       aaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCg                                                    >  1:1252889/1‑90 (MQ=255)

                                          ccATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAAc                                                 <  2:1757475/90‑1 (MQ=255)

                                            aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAAc                                                 >  2:2783840/1‑88 (MQ=255)

                                            aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTc                                               >  1:1510223/1‑90 (MQ=255)

                                             ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACg                                                                   >  2:3392913/1‑69 (MQ=255)

                                             ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTca                                              >  1:135336/1‑90 (MQ=255)

                                             ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTca                                              >  2:2389149/1‑90 (MQ=255)

                                              tGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcag                                             <  2:1558587/90‑1 (MQ=255)

                                                   gCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcagccagc                                        >  2:1851070/1‑90 (MQ=255)

                                                     tttGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCAc                                      <  2:751158/90‑1 (MQ=255)

                                                       tGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCAcgc                                    <  2:1510223/90‑1 (MQ=255)

                                                       tGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCAcgc                                    <  1:833172/90‑1 (MQ=255)

                                                              gATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGcagcag                             >  1:3258180/1‑90 (MQ=255)

                                                              gATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGcagcag                             >  1:4579/1‑90 (MQ=255)

                                                              gATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGcagcag                             >  1:968859/1‑90 (MQ=255)

                                                                tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                           <  2:652453/90‑1 (MQ=255)

                                                                tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                           >  2:512605/1‑90 (MQ=255)

                                                                tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                           >  2:569930/1‑90 (MQ=255)

                                                                 cATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcg                          >  1:3124020/1‑90 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAAc                                                                    <  2:1168449/47‑1 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                         >  1:347086/1‑90 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                         >  1:54989/1‑90 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                         >  2:1809807/1‑90 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                         >  1:2584247/1‑90 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                         >  2:2654489/1‑90 (MQ=255)

                                                                  aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                         >  2:1103784/1‑90 (MQ=255)

                                                                    gTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgggc                       <  1:1776776/90‑1 (MQ=255)

                                                                      cGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGgcgc                     <  2:45556/90‑1 (MQ=255)

                                                                      cGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGgcgc                     <  1:1809807/90‑1 (MQ=255)

                                                                      cGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGgcgc                     <  2:1675861/90‑1 (MQ=255)

                                                                       gATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGcgcg                    >  1:1186984/1‑90 (MQ=255)

                                                                         tcgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCggg                  >  2:3407355/1‑89 (MQ=255)

                                                                         tcgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGa                  >  1:1409556/1‑90 (MQ=255)

                                                                          cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                 <  2:2530523/90‑1 (MQ=255)

                                                                          cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                 <  1:2960660/90‑1 (MQ=255)

                                                                          cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                 <  1:3207212/90‑1 (MQ=255)

                                                                          cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                 <  1:2518030/90‑1 (MQ=255)

                                                                          cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                 <  2:4430/90‑1 (MQ=255)

                                                                           gtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                >  1:424402/1‑90 (MQ=255)

                                                                           gtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                >  1:1569540/1‑90 (MQ=255)

                                                                           gtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                >  2:1102406/1‑90 (MQ=255)

                                                                            tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg               <  2:2971492/90‑1 (MQ=255)

                                                                            tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg               >  1:1677050/1‑90 (MQ=255)

                                                                            tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg               <  1:677365/90‑1 (MQ=255)

                                                                             cgcgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGc              <  1:1454118/90‑1 (MQ=255)

                                                                             cgcgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGc              >  1:2092048/1‑90 (MQ=255)

                                                                             cgcgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGc              <  1:1215168/90‑1 (MQ=255)

                                                                               cgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAt            <  1:2464250/90‑1 (MQ=255)

                                                                               cgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAt            <  2:347086/90‑1 (MQ=255)

                                                                               cgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAt            <  2:2251587/90‑1 (MQ=255)

                                                                                  gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGGCGGCATCgt         >  2:1706010/1‑90 (MQ=255)

                                                                                  gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgt         >  2:3214011/1‑90 (MQ=255)

                                                                                  gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgt         >  1:1135214/1‑90 (MQ=255)

                                                                                   ccGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtg        <  1:3250582/90‑1 (MQ=255)

                                                                                    cgatGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg       <  1:1968935/87‑1 (MQ=255)

                                                                                    cGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg       <  2:922093/90‑1 (MQ=255)

                                                                                    cGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg       <  2:2986495/90‑1 (MQ=255)

                                                                                     ggTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGcgcg                    >  1:1013597/1‑76 (MQ=255)

                                                                                     ggTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGcgcg                    <  2:1013597/76‑1 (MQ=255)

                                                                                      gTGCTGCGCGGCACCGGGGGGACCAACGCCCGGGAAACCATCGAACTCAGCCAGAACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg     <  2:2418484/90‑1 (MQ=255)

                                                                                      gTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCATCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg     <  2:3349292/90‑1 (MQ=255)

                                                                                      gTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg     >  2:1238355/1‑90 (MQ=255)

                                                                                      gTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg     >  2:1392014/1‑90 (MQ=255)

                                                                                         cTGATCGGCACCGGCGGCCCCAACACCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc  <  1:2776560/90‑1 (MQ=255)

                                                                                         cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc  <  2:1079441/90‑1 (MQ=255)

                                                                                         cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc  <  2:3258180/90‑1 (MQ=255)

                                                                                         cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc  <  2:19969/90‑1 (MQ=255)

GCGGTGGCGAGTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATC  >  NZ_CP009273/278134‑278312

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.