New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 = 278223179 (1.520)11 (0.100) 8/154 4.0 5.9% coding (235/909 nt) yagE 2‑keto‑3‑deoxygluconate aldolase
?NZ_CP009273 = 278229 191 (1.790)coding (241/909 nt) yagE 2‑keto‑3‑deoxygluconate aldolase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 197 total aligned reads displayed.

GTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCC  >  NZ_CP009273/278144‑278318
                                                                                     |                                                                                         
gTTCTCCCAGCTCGGCGCCGAAGAGCGAAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCAc                                                                                       <  2:1519783/90‑1 (MQ=255)
  tctcCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGACCGTCGCGTGCCGGTGCTGATCGGCACcg                                                                                     >  2:3226685/1‑90 (MQ=255)
     cccAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACcggcg                                                                                  <  2:1058675/90‑1 (MQ=255)
      ccAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACcggcgg                                                                                 <  2:2472788/90‑1 (MQ=255)
            cGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCaa                                                                           >  2:3223564/1‑90 (MQ=255)
             ggCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAAc                                                                          >  2:2834706/1‑90 (MQ=255)
              gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACg                                                                         <  1:3197895/90‑1 (MQ=255)
              gcgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACg                                                                         >  1:2971492/1‑90 (MQ=255)
               cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTTCTGATCGGCACCGGCGGCACCAACGc                                                                        <  2:2916391/90‑1 (MQ=255)
               cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGc                                                                        <  2:2101732/90‑1 (MQ=255)
               cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGc                                                                        >  2:1470180/1‑90 (MQ=255)
               cgcCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCAATCATGTCGATCGTCCCGTGCCGGGGCTGATCGGCACCGGCGGCACCAACGc                                                                        >  2:3047258/1‑90 (MQ=255)
                      gagCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGaa                                                                 <  2:2330081/90‑1 (MQ=255)
                      gagCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGaa                                                                 <  2:2715721/90‑1 (MQ=255)
                       agCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGaaa                                                                <  1:1888742/90‑1 (MQ=255)
                        gCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAAc                                                               >  2:2464250/1‑90 (MQ=255)
                           tAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCAt                                                            >  1:1869874/1‑90 (MQ=255)
                            aaaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATc                                                           <  1:1437890/90‑1 (MQ=255)
                            aaaGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATc                                                           <  2:48511/90‑1 (MQ=255)
                                ccATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCa                                                                            >  1:2718990/1‑69 (MQ=255)
                                  aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAAc                                                       >  2:2783840/1‑88 (MQ=255)
                                  aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAAc                                                       <  1:2783840/88‑1 (MQ=255)
                                  aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTc                                                     >  1:200364/1‑90 (MQ=255)
                                  aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTc                                                     >  2:1772685/1‑90 (MQ=255)
                                  aTTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTc                                                     >  1:1510223/1‑90 (MQ=255)
                                   ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACg                                                                         <  1:3392913/69‑1 (MQ=255)
                                   ttGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTca                                                    >  2:2389149/1‑90 (MQ=255)
                                    tGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcag                                                   <  2:1558587/90‑1 (MQ=255)
                                         gCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcagccagc                                              >  2:1851070/1‑90 (MQ=255)
                                         gCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTcagccagc                                              >  1:3253180/1‑90 (MQ=255)
                                          cTTTGCTATCGATCATGTAGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCa                                             >  2:1330599/1‑90 (MQ=255)
                                            ttGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCAcg                                           >  2:1171295/1‑90 (MQ=255)
                                             tGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCAcgc                                          <  1:753356/90‑1 (MQ=255)
                                             tGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCAcgc                                          <  2:1510223/90‑1 (MQ=255)
                                                      tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                                 <  2:652453/90‑1 (MQ=255)
                                                      tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                                 <  2:1898581/90‑1 (MQ=255)
                                                      tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                                 >  1:3246847/1‑90 (MQ=255)
                                                      tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                                 >  2:512605/1‑90 (MQ=255)
                                                      tCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggc                                 >  2:569930/1‑90 (MQ=255)
                                                       cATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcg                                >  1:3124020/1‑90 (MQ=255)
                                                        aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                               >  2:2654489/1‑90 (MQ=255)
                                                        aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                               >  2:431920/1‑90 (MQ=255)
                                                        aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                               >  2:1809807/1‑90 (MQ=255)
                                                        aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                               >  2:3018707/1‑90 (MQ=255)
                                                        aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                               >  1:347086/1‑90 (MQ=255)
                                                        aTGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcgg                               >  1:54989/1‑90 (MQ=255)
                                                         tGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAggcggg                              >  2:3406352/1‑90 (MQ=255)
                                                            cGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGgcgc                           <  2:1675861/90‑1 (MQ=255)
                                                            cGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGgcgc                           <  1:1809807/90‑1 (MQ=255)
                                                            cGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGgcgc                           <  2:45556/90‑1 (MQ=255)
                                                             gATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGcgcg                          >  1:1186984/1‑90 (MQ=255)
                                                                cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                       <  2:2530523/90‑1 (MQ=255)
                                                                cgtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGAc                       <  2:791785/90‑1 (MQ=255)
                                                                 gtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                      >  2:1102406/1‑90 (MQ=255)
                                                                 gtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                      >  1:2465679/1‑90 (MQ=255)
                                                                 gtcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                      >  1:1569540/1‑90 (MQ=255)
                                                                 gtcgCGTGCCGGTACTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACg                      >  1:3357432/1‑90 (MQ=255)
                                                                  tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg                     <  2:2971492/90‑1 (MQ=255)
                                                                  tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg                     >  1:1677050/1‑90 (MQ=255)
                                                                  tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg                     <  1:140659/90‑1 (MQ=255)
                                                                  tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg                     >  1:1358459/1‑90 (MQ=255)
                                                                  tcgCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACgg                     <  1:677365/90‑1 (MQ=255)
                                                                   cgcgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGc                    <  1:1215168/90‑1 (MQ=255)
                                                                     cgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAt                  <  1:2917183/90‑1 (MQ=255)
                                                                     cgTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAt                  <  2:1968634/90‑1 (MQ=255)
                                                                        gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGGCGGCATCgt               >  2:1706010/1‑90 (MQ=255)
                                                                        gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgt               >  1:1135214/1‑90 (MQ=255)
                                                                        gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgt               >  1:2536578/1‑90 (MQ=255)
                                                                        gCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgt               >  1:792577/1‑90 (MQ=255)
                                                                          cGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg             <  2:922093/90‑1 (MQ=255)
                                                                          cGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg             <  2:2986495/90‑1 (MQ=255)
                                                                          cGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtgg             <  1:968915/90‑1 (MQ=255)
                                                                           ggTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGcgcg                          >  1:1013597/1‑76 (MQ=255)
                                                                            gTGCTGCGCGGCACCGGGGGGACCAACGCCCGGGAAACCATCGAACTCAGCCAGAACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg           <  2:2418484/90‑1 (MQ=255)
                                                                            gTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg           >  2:1392014/1‑90 (MQ=255)
                                                                            gTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg           <  2:1128623/90‑1 (MQ=255)
                                                                            gTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCgtggtg           >  1:3281346/1‑90 (MQ=255)
                                                                               cTGATCGGTACGGGCGGGACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGCCGCGGGCGGCATCGTGGTGATc        <  2:3408049/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAATCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  1:127771/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  2:2218260/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  2:3385637/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  2:3258180/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  1:431920/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  2:1079441/90‑1 (MQ=255)
                                                                               cTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATc        <  2:19969/90‑1 (MQ=255)
                                                                                tGATCGGCCCCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCa       <  2:1743490/90‑1 (MQ=255)
                                                                                tGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCa       <  1:472281/90‑1 (MQ=255)
                                                                                tGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCa       <  1:926222/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCATCTCCCGGGAAACCATCGATCTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCAGCGTGGTGATCaa      <  2:1748049/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      <  2:9845/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      <  2:2171198/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      >  1:2434998/1‑90 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      <  1:2216334/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      <  1:1959436/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      <  1:1755593/90‑1 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      >  1:1244686/1‑90 (MQ=255)
                                                                                 gATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCaa      >  1:1058526/1‑90 (MQ=255)
                                                                                   tCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCGGCAGGCGGGCGCGGGGGGCAGCGGGGGGATCaaac    >  2:661081/1‑88 (MQ=255)
                                                                                     ggCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAAcccc  >  2:1032895/1‑90 (MQ=255)
                                                                                     ggCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAAcccc  <  1:516451/90‑1 (MQ=255)
                                                                                     |                                                                                         
GTTCTCCCAGCTCGGCGCCGAAGAGCGTAAAGCCATTGCCCGCTTTGCTATCGATCATGTCGATCGTCGCGTGCCGGTGCTGATCGGCACCGGCGGCACCAACGCCCGGGAAACCATCGAACTCAGCCAGCACGCGCAGCAGGCGGGCGCGGACGGCATCGTGGTGATCAACCCC  >  NZ_CP009273/278144‑278318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.