New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 282361	97 (1.820)	4 (0.090)	4/146	3.5	4.7%	coding (1256/1383 nt)	yagG	MFS transporter
	?	NZ_CP009273	= 282393	78 (1.670)					coding (1288/1383 nt)	yagG	MFS transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGGCGCAGGGC  >  NZ_CP009273/282272‑282449                                                                                          |                                                                                         ttCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCAt                                                                                          <  2:483645/90‑1 (MQ=255)  tCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATg                                                                                         <  2:1535785/90‑1 (MQ=255)   ccGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGt                                                                                        <  1:177327/90‑1 (MQ=255)    cGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGtt                                                                                       >  2:440992/1‑90 (MQ=255)     gCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTtc                                                                                      <  2:977795/90‑1 (MQ=255)     gCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTtc                                                                                      >  2:337090/1‑90 (MQ=255)          cagcagcGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTcatcat                                                                                 >  2:1454099/1‑90 (MQ=255)          cagcagcGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTcatcat                                                                                 >  1:491181/1‑90 (MQ=255)             cagcGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCt                                                                              <  1:440992/90‑1 (MQ=255)             cagcGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCt                                                                              <  1:22436/90‑1 (MQ=255)             cagcGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCt                                                                              <  2:617010/90‑1 (MQ=255)              agcGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTg                                                                             <  1:620302/90‑1 (MQ=255)                 gTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          <  2:56029/90‑1 (MQ=255)                 gTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          >  2:826758/1‑90 (MQ=255)                 gTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          <  1:502461/90‑1 (MQ=255)                 gTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          >  1:206952/1‑90 (MQ=255)                  tGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGc                                                                         <  2:505676/90‑1 (MQ=255)                  tGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGc                                                                         <  1:1289463/90‑1 (MQ=255)                  tGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGc                                                                         <  2:1091346/90‑1 (MQ=255)                   gCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGct                                                                        <  2:979841/90‑1 (MQ=255)                     aGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGctct                                                                      <  2:1539833/90‑1 (MQ=255)                     aGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCACCATGCTGTCGctct                                                                      <  2:1327972/90‑1 (MQ=255)                        cGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACa                                                                   <  1:1060855/90‑1 (MQ=255)                        cGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGATGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACa                                                                   <  2:327861/90‑1 (MQ=255)                         ggTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACaa                                                                  >  2:557510/1‑90 (MQ=255)                            tGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCt                                                               <  2:1266516/90‑1 (MQ=255)                            tGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCt                                                               <  1:607071/90‑1 (MQ=255)                              aGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCa                                                             >  1:366487/1‑90 (MQ=255)                                  gCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          >  2:693243/1‑73 (MQ=255)                                  gCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          <  1:693243/73‑1 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        <  1:1451245/90‑1 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        >  2:1318167/1‑90 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        <  2:1376380/90‑1 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        <  2:629284/90‑1 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        <  2:691298/90‑1 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        <  2:42884/90‑1 (MQ=255)                                   cTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGAt                                                        >  1:409019/1‑90 (MQ=255)                                    tCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATg                                                       >  1:824957/1‑90 (MQ=255)                                    tCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATg                                                       >  1:1343750/1‑90 (MQ=255)                                    tCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCCGTCGCTCTACAAGCTCACCGATg                                                       >  1:374293/1‑90 (MQ=255)                                      accaccATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGcc                                                     <  2:533252/90‑1 (MQ=255)                                       ccaccaTCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGccc                                                    >  2:534491/1‑90 (MQ=255)                                            aTCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTg                                               >  2:55123/1‑90 (MQ=255)                                            aTCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTg                                               >  2:1496276/1‑90 (MQ=255)                                            aTCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTg                                               >  1:1485044/1‑90 (MQ=255)                                            aTCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTg                                               >  2:652353/1‑90 (MQ=255)                                            aTCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTg                                               >  1:327271/1‑90 (MQ=255)                                                aaaTTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAgg                                           <  2:803612/90‑1 (MQ=255)                                                 aaTTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTg                                                                             <  2:468551/55‑1 (MQ=255)                                                 aaTTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTg                                                                             >  1:468551/1‑55 (MQ=255)                                                 aaTTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTagagca                                          <  2:1295061/90‑3 (MQ=255)                                                 aaTTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGc                                          >  2:76656/1‑90 (MQ=255)                                                     ctgttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTgg                                              <  1:304949/82‑1 (MQ=255)                                                     ctgttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTgg                                              >  2:304949/1‑82 (MQ=255)                                                     ctgttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATc                                      >  1:1411511/1‑90 (MQ=255)                                                     ctgttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATc                                      >  2:920198/1‑90 (MQ=255)                                                      tgttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCcg                                                   <  1:174164/76‑1 (MQ=255)                                                      tgttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCcg                                                   >  2:174164/1‑76 (MQ=255)                                                       gttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAg                                    >  2:290963/1‑90 (MQ=255)                                                       gttctgCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAg                                    >  2:1554895/1‑90 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          <  2:52748/47‑1 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCg                                                                          >  1:52748/1‑47 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACa                                                                   <  2:553083/54‑1 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACa                                                                   >  1:553083/1‑54 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGa                                             <  1:1122638/76‑1 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGa                                             >  2:1122638/1‑76 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGc                               >  2:930733/1‑90 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGAGTGGAGGCCATCAGCCGGc                               >  2:1385690/1‑90 (MQ=255)                                                            gCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATACCCGCGTGGAGGCCATCAGCCGGc                               >  1:1319781/1‑90 (MQ=255)                                                            gCGTGGTGCCAGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGc                               >  2:905151/1‑90 (MQ=255)                                                                ggtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           <  1:1402855/90‑1 (MQ=255)                                                                ggtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           <  1:992194/90‑1 (MQ=255)                                                                ggtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           <  1:55123/90‑1 (MQ=255)                                                                ggtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           <  2:420971/90‑1 (MQ=255)                                                                ggtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           <  2:937873/90‑1 (MQ=255)                                                                 gtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTg                          >  2:1575586/1‑90 (MQ=255)                                                                 gtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTg                          >  2:213100/1‑90 (MQ=255)                                                                 gtgCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTg                          >  1:194335/1‑90 (MQ=255)                                                                     cGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTa                      <  2:895188/90‑1 (MQ=255)                                                                      ggtggtGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTaa                     >  1:1055693/1‑90 (MQ=255)                                                                           tgCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGccc                                                    <  2:1593349/54‑1 (MQ=255)                                                                           tgCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGccc                                                    >  1:1593349/1‑54 (MQ=255)                                                                           tgCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           >  2:524072/1‑79 (MQ=255)                                                                           tgCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCt                           <  1:524072/79‑1 (MQ=255)                                                                           tgCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCAcc                >  1:758790/1‑90 (MQ=255)                                                                           tgCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCAcc                >  2:821803/1‑90 (MQ=255)                                                                               ctACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACcgcgc            <  2:408182/90‑1 (MQ=255)                                                                                tACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACcgcgcg           <  1:1496276/90‑1 (MQ=255)                                                                                 aCGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGc                   <  2:597072/81‑1 (MQ=255)                                                                                 aCGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGc                   >  1:597072/1‑81 (MQ=255)                                                                                 aCGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCgcgg          >  2:1162948/1‑90 (MQ=255)                                                                                 aCGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCgcgg          >  2:968565/1‑90 (MQ=255)                                                                                 aCGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCgcgg          >  2:1449799/1‑90 (MQ=255)                                                                                 aCGCGGGCATGTTCATCATGCTGTCGCTCAACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCgcgg          >  2:723057/1‑90 (MQ=255)                                                                                    cgGGCATGTTCATCATGCTGTCGCTCTACAAGCTCAc                                                            >  1:1479342/1‑37 (MQ=255)                                                                                    cgGGCATGTTCATCATGCTGTCGCTCTACAAGCTCAc                                                            <  2:1479342/37‑1 (MQ=255)                                                                                    cgGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGgcgc       <  1:1600161/90‑1 (MQ=255)                                                                                    cgGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGgcgc       <  1:826758/90‑1 (MQ=255)                                                                                         aTGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGGCGCAGGGc  >  2:257109/1‑90 (MQ=255)                                                                                          |                                                                                         TTCCGCCAGCAGCAGCGTGCAGCCGGTTGAGGTGCTCACCACCATCAAAATTCTGTTCTGCGTGGTGCCGGTGGTGCTCTACGCGGGCATGTTCATCATGCTGTCGCTCTACAAGCTCACCGATGCCCGCGTGGAGGCCATCAGCCGGCAGCTGATTAAGCACCGCGCGGCGCAGGGC  >  NZ_CP009273/282272‑282449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.