| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 4229668 = | 51 (1.460) | 4 (0.130) | 4/146 | 2.1 | 9.2% | intergenic (+10/+37) | yjbH/BW25113_RS25330 | YjbH domain‑containing protein/periplasmic protein |
| ? | NZ_CP009273 | 4229700 = | 35 (1.150) | intergenic (+42/+5) | yjbH/BW25113_RS25330 | YjbH domain‑containing protein/periplasmic protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/4229762‑4229668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcaccttCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCC > NZ_CP009273/4229700‑4229787 CACACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGC < 2:143302/90‑1 ACACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCA < 1:76264/90‑1 ACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACC > 2:498215/1‑90 CCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCT < 1:281770/90‑1 CCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCT < 2:371804/90‑1 CCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCT < 2:573886/90‑1 GATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCTTCA > 2:694516/1‑90 ATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCTTCAT < 1:694516/90‑1 GCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCT > 1:323464/1‑83 GCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCT < 2:323464/83‑1 GCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCA < 2:385425/90‑1 AGGTCCCAGTGAGTGCGAAAACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCCCTCCCGGTTTGCGATCTGG < 2:944792/90‑1 CTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTC < 1:281727/90‑1 CTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTC < 1:399699/90‑1 TTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCC > 1:881701/1‑90 TTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCC > 1:955152/1‑90 CACACCAGATCGCAAACCGGGAGTGAACTGCGTTCCTGATGGCTCGACAGGCCATTAAGAATGAAGGTGCCAGTGAGTGCGAAAACTGGCACCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP009273/4229762‑4229668‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcaccttCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCC > NZ_CP009273/4229700‑4229787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |