New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | = 1205074 | 0 (0.000) | 6 (0.710) | 4/136 | 0.5 | 44.4% | coding (41/540 nt) | BW25113_RS06005 | phage tail protein |
? | NZ_CP009273 | 2465376 = | 15 (1.780) | coding (283/636 nt) | BW25113_RS12285 | hypothetical protein |
CGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/1204979‑1205074 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttct‑cccaaaccaaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCC > NZ_CP009273/2465376‑2465407 CGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCA > 1:144156/1‑90 TGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCAAACCAAGGTTTTCGAGAGCCGTTTGCAC < 1:215075/90‑1 CGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCCAAACCAAGGTTTTCGAGAGCCGTTTGCACag > 2:266508/1‑88 ATGCAGAGCCTTCT‑CCCAAACCAAGGTTTTCGAGAGCCGTT > 1:232982/1‑41 ATGCAGAGCCTTCT‑CCCAAACCAAGGTTTTCGAGAGCCGTT < 2:232982/41‑1 AGAGCCTTCT‑CCCAAACCAAGGTTTTCGAGAGCCGTTTGCAC < 1:63840/42‑1 AGAGCCTTCT‑CCCAAACCAAGGTTTTCGAGAGCCGTTTGCAC > 2:63840/1‑42 AACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCC < 1:144335/38‑1 AACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCC > 2:144335/1‑38 CGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/1204979‑1205074 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttct‑cccaaaccaaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCC > NZ_CP009273/2465376‑2465407 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |