| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 1205074 | 0 (0.000) | 6 (0.710) | 4/136 | 0.5 | 44.4% | coding (41/540 nt) | BW25113_RS06005 | phage tail protein |
| ? | NZ_CP009273 | 2465376 = | 15 (1.780) | coding (283/636 nt) | BW25113_RS12285 | hypothetical protein | |||||
AAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGC > NZ_CP009273/2465298‑2465449 | aaaGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag < 2:129112/90‑1 (MQ=255) tggcggagtggctgaaggccacggaaccgggacaccaacaggtaatgcagagccttctcccaaaccaaGGTTTTCGAGAGCCGTTTGCAc < 1:215075‑M2/22‑1 (MQ=255) cggagtggctgaaggccacggaaccgggacaccaacaggtaatgcagagccttctccccaaaccaaGGTTTTCGAGAGCCGTTTGcacag > 2:266508‑M2/67‑88 (MQ=255) tatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag > 1:46563/1‑72 (MQ=255) tatCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag < 2:46563/72‑1 (MQ=255) cAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCa > 1:190307/1‑90 (MQ=255) gTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAAtt < 2:115670/90‑1 (MQ=255) tGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCAc < 2:79377/71‑1 (MQ=255) tGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCAc > 1:79377/1‑71 (MQ=255) ccccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCaa > 1:224206/1‑90 (MQ=255) ccccTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCaa > 1:117794/1‑90 (MQ=255) tGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGGGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACgg > 1:152965/1‑90 (MQ=255) gTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag < 1:94622/49‑1 (MQ=255) gTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGagag > 2:94622/1‑49 (MQ=255) tACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCtt > 2:180777/1‑90 (MQ=255) cATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGc < 1:56364/90‑1 (MQ=255) atgcagagccttctcccaaaccaaGGTTTTCGAGAGCCgtt < 2:232982‑M2/17‑1 (MQ=255) atgcagagccttctcccaaaccaaGGTTTTCGAGAGCCgtt > 1:232982‑M2/25‑41 (MQ=255) agagccttctcccaaaccaaGGTTTTCGAGAGCCGTTTGCAc < 1:63840‑M2/22‑1 (MQ=255) agagccttctcccaaaccaaGGTTTTCGAGAGCCGTTTGCAc > 2:63840‑M2/21‑42 (MQ=255) gCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACagcagc < 2:117794/90‑1 (MQ=255) aaccaaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTcc > 2:144335‑M2/7‑38 (MQ=255) aaccaaGGTTTTCGAGAGCCTTTTGCACCGTGCCGTcc < 1:144335‑M2/32‑1 (MQ=255) | AAAGCATAAAACTACCCATATCAGGTATCTGATTCGCCCCTGTCCCTACATTTCTTTTAGCCGCTTCTCCCAAACCAAGGTTTTCGAGAGCCTTTTGCACCGTGCCGTCCAATTTGATATCGCCAAACGGATTCTTGCGGCTTAACAGCAGC > NZ_CP009273/2465298‑2465449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |