| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 1205074 | 0 (0.000) | 6 (0.710) | 4/136 | 0.5 | 44.4% | coding (41/540 nt) | BW25113_RS06005 | phage tail protein |
| ? | NZ_CP009273 | 2465376 = | 15 (1.780) | coding (283/636 nt) | BW25113_RS12285 | hypothetical protein | |||||
TGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT > NZ_CP009273/1205007‑1205106 | tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCAAACCAAggttttcgagagccgtttgcac < 1:215075‑M1/90‑23 (MQ=255) cGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCCAAACCAAggttttcgagagccgtttgcacag > 2:266508‑M1/1‑66 (MQ=255) aTGCAGAGCCTTCT‑CCCAAACCAAggttttcgagagccgtt > 1:232982‑M1/1‑24 (MQ=255) aTGCAGAGCCTTCT‑CCCAAACCAAggttttcgagagccgtt < 2:232982‑M1/41‑18 (MQ=255) agagCCTTCT‑CCCAAACCAAggttttcgagagccgtttgcac < 1:63840‑M1/42‑23 (MQ=255) agagCCTTCT‑CCCAAACCAAggttttcgagagccgtttgcac > 2:63840‑M1/1‑20 (MQ=255) aaCCAAggttttcgagagccttttgcaccgtgccgtcc < 1:144335‑M1/38‑33 (MQ=255) aaCCAAggttttcgagagccttttgcaccgtgccgtcc > 2:144335‑M1/1‑6 (MQ=255) | TGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCT‑CCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAT > NZ_CP009273/1205007‑1205106 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |