New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP009273	= 3333655	9 (0.410)	3 (0.150)	3/152	1.6	19.3%	coding (22/978 nt)	yrbG	calcium/sodium antiporter
	?	NZ_CP009273	= 3333682	17 (0.870)					coding (49/978 nt)	yrbG	calcium/sodium antiporter
Rejected: Frequency below/above cutoff threshold.

TTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCAT  >  NZ_CP009273/3333582‑3333737                                                                          |                                                                                   tttCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACt                                                                    >  2:577622/1‑90 (MQ=255)    cTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACtttt                                                                 <  1:528012/90‑1 (MQ=255)         aaTCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCg                                                            <  1:529793/90‑1 (MQ=255)           tCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGtt                                                          <  1:162443/90‑1 (MQ=255)                    gACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgcc                                                 <  1:582718‑M2/90‑9 (MQ=255)                      ccGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgt                                               >  2:305824‑M2/1‑80 (MQ=255)                                taCCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGtt                                     >  1:39968/1‑90 (MQ=255)                                     gaagaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatcta                                >  1:382386‑M1/1‑38 (MQ=255)                                        gaaAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtagctaaaagcatctaacg                             >  1:343496‑M2/1‑62 (MQ=255)                                            ggACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCt                         >  1:253125/1‑90 (MQ=255)                                               cGTTAGATGCTTTTAGCTACGGCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttc                      >  1:343496‑M1/1‑28 (MQ=255)                                                  tAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTacagtgccgtagctaaaagcatctaacgtcctttcttc                   >  1:382386‑M2/1‑52 (MQ=255)                                                      tGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGcc               >  1:204968/1‑90 (MQ=255)                                                          tttAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAAc           >  2:355240/1‑90 (MQ=255)                                                                 aCGGCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccgg    >  2:305824‑M1/1‑10 (MQ=255)                                                                  cGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCa   >  1:333672/1‑90 (MQ=255)                                                                   ggCACTGTaaacgaccaaaagtaaaccaacaattaacagtgccgtagctaaaagcatctaacgtcctttcttcaggtatactcgccggtc  <  1:582718‑M1/90‑83 (MQ=255)                                                                          |                                                                                   TTTCTGAAAATCTTCAGCGGACCGGCGAGTATACCTGAAGAAAGGACGTTAGATGCTTTTAGCTACGGCACTGTTAATTGTTGGTTTACTTTTGGTCGTTTACAGTGCCGACCGCCTGGTTTTTGCCGCGTCTATTCTTTGCCGAACCTTTGGCAT  >  NZ_CP009273/3333582‑3333737

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.