| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NZ_CP009273 | 3,390,478 | Δ45 bp | coding (633‑677/1470 nt) | rng ← | ribonuclease G |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NZ_CP009273 | 3390478 | 3390522 | 45 | 12 [0] | [0] 14 | rng | ribonuclease G |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3390477 | 0 (0.000) | 11 (1.090) | 9/152 | 0.2 | 100% | coding (678/1470 nt) | rng | ribonuclease G |
| ? | NZ_CP009273 | 3390523 = | 0 (0.000) | coding (632/1470 nt) | rng | ribonuclease G | |||||
CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3390383‑3390477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttcgCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTACGCTCCATAACTTTGGTCCAGACGCGTTTCAGATAAGCGGCATCGGAGG > NZ_CP009273/3390523‑3390607 CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCA > 2:42806/1‑90CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCA > 2:32350/1‑90CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCA > 1:105721/1‑90CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCA > 2:279694/1‑90CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCA > 2:186564/1‑90 TGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTA > 1:297448/1‑90 GTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTAC < 1:226788/90‑1 CGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGAT > 2:301209/1‑90 ATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGATAACGG > 2:195154/1‑90 GGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGATAACGGGTCTGCGGGCG < 1:301209/90‑1 AACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTAC > 1:153722/1‑63 AACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTAC < 2:153722/63‑1 CAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTAC < 2:122139/90‑1 CAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTAC < 1:279694/90‑1 AGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTACGC < 1:186564/90‑1 AACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCGCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTACGCTCC > 2:13210/1‑90 GTTCGCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTACGCTCCATAACTTTGGTCCAGACGCGTTTCAGATAAGCGGCATCGGAGG > 1:140502/1‑90 CCAGCTTGCTTGTCATCTCGGGAATGTACTCCGAGGTGAACTCAAGTAACGCTTCGTAAGTCAGGCGTGAGTCAACGCGAATGCGGTCCAGTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3390383‑3390477‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttcgCCGTACAGCTGATAACGGGTCTGCGGGCGTTTTTTACGCTCCATAACTTTGGTCCAGACGCGTTTCAGATAAGCGGCATCGGAGG > NZ_CP009273/3390523‑3390607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |