| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4607264 | 3 (0.070) | 49 (1.300) | 29/160 | 0.1 | 85.4% | coding (125/780 nt) | deoC | deoxyribose‑phosphate aldolase |
| ? | NZ_CP009273 | 4608011 = | 14 (0.370) | intergenic (+92/‑35) | deoC/deoA | deoxyribose‑phosphate aldolase/thymidine phosphorylase | |||||
GAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/4607175‑4607264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG > NZ_CP009273/4608011‑4608096 GAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAA > 1:594078/1‑90 TTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGC < 2:309114/90‑1 TTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGC < 1:548592/90‑1 TGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCC > 2:97874/1‑90 TGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCC < 2:520874/90‑1 GATGGACCTGACCACCCTGAATGACGACGACACCGATGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCG < 1:930005/90‑1 GATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCG < 1:53130/90‑1 CCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCAT < 1:360799/90‑1 TGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATAC < 1:1027014/90‑1 GACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACT > 2:351589/1‑90 CCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTT > 1:1098825/1‑90 CCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTT > 2:1091705/1‑90 CCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTT > 1:1059630/1‑90 CCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTT < 1:476498/90‑1 CCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTT > 1:357369/1‑90 GAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTC > 1:102304/1‑90 ATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGG < 2:669232/90‑1 ATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGG < 1:814044/90‑1 CGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGG > 1:528897/1‑90 CGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGG > 2:295508/1‑90 GAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCG < 1:301597/90‑1 AAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGC < 2:317391/90‑1 GATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAG > 2:748811/1‑90 CGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTT > 1:586095/1‑55 CGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTT < 2:586095/55‑1 TGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATT > 1:493248/1‑90 TGTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATT > 2:49058/1‑90 GTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTC < 2:357369/90‑1 GTGTCATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTC < 2:772030/90‑1 ATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAA > 1:1015387/1‑90 ATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGG > 1:162008/1‑51 ATCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGG < 2:162008/51‑1 TCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACA > 2:734533/1‑73 TCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACA < 1:734533/73‑1 TCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGT > 1:209085/1‑55 TCAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGT < 2:209085/55‑1 CAGGCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAA < 2:307856/90‑1 GCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACG > 2:1061655/1‑90 GCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGC > 1:127279/1‑66 GCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGC > 1:1053971/1‑66 GCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGC < 2:127279/66‑1 GCCAAAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGC < 2:1053971/66‑1 GCCAAAACTCCGGTCGGCAAAAGACGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACG > 1:300368/1‑90 AAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAGACGTGAT < 1:20520/90‑1 AAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAT < 1:1061655/90‑1 AAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAT > 2:143778/1‑90 AAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAT < 2:132490/90‑1 AAACTCCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAT < 1:972129/90‑1 CCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCA > 1:1053827/1‑90 CCGGTCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCA < 2:1097138/90‑1 CGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGC < 2:102304/90‑1 GCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG < 2:670713/90‑1 GCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG < 1:687971/90‑1 GCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG < 1:496690/90‑1 GAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/4607175‑4607264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG > NZ_CP009273/4608011‑4608096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |