| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4607264 | 3 (0.070) | 49 (1.300) | 29/160 | 0.1 | 85.4% | coding (125/780 nt) | deoC | deoxyribose‑phosphate aldolase |
| ? | NZ_CP009273 | 4608011 = | 14 (0.370) | intergenic (+92/‑35) | deoC/deoA | deoxyribose‑phosphate aldolase/thymidine phosphorylase | |||||
GAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCG > NZ_CP009273/4607175‑4607350 | gAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAA > 1:594078‑M1/1‑90 (MQ=255) ttGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagc < 2:309114‑M1/90‑5 (MQ=255) ttGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagc < 1:548592‑M1/90‑5 (MQ=255) tGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagcc > 2:97874‑M1/1‑85 (MQ=255) tGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagcc < 2:520874‑M1/90‑6 (MQ=255) gATGGACCTGACCACCCTGAATGACGACGACACCGATGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccg < 1:930005‑M1/90‑7 (MQ=255) gATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccg < 1:53130‑M1/90‑7 (MQ=255) ggcccTGACCCCCCTGAATGACGACGACCCCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACcgccgc < 2:1077287/87‑1 (MQ=255) ccTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcat < 1:360799‑M1/90‑13 (MQ=255) tGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatac < 1:1027014‑M1/90‑15 (MQ=255) gACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatact > 2:351589‑M1/1‑75 (MQ=255) cccTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactctttt > 1:1098825‑M1/1‑70 (MQ=255) cccTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactctttt > 2:1091705‑M1/1‑70 (MQ=255) cccTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactctttt > 1:1059630‑M1/1‑70 (MQ=255) cccTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactctttt > 1:357369‑M1/1‑70 (MQ=255) cccTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactctttt < 1:476498‑M1/90‑21 (MQ=255) gAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctc > 1:102304‑M1/1‑66 (MQ=255) aTGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgg < 2:669232‑M1/90‑27 (MQ=255) aTGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgg < 1:814044‑M1/90‑27 (MQ=255) cgacgacACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggagg > 2:295508‑M1/1‑60 (MQ=255) cgacgacACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggagg > 1:528897‑M1/1‑60 (MQ=255) ccGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGa > 1:666563/1‑90 (MQ=255) gagaAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCt < 2:52167/90‑1 (MQ=255) gaAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcg < 1:301597‑M1/90‑46 (MQ=255) aaaGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgc < 2:317391‑M1/90‑47 (MQ=255) gATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaag > 2:748811‑M1/1‑39 (MQ=255) cGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttt > 1:586095‑M1/1‑36 (MQ=255) cGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttt < 2:586095‑M1/55‑20 (MQ=255) tgtgTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattatt > 1:493248‑M1/1‑31 (MQ=255) tgtgTCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattatt > 2:49058‑M1/1‑31 (MQ=255) gtgtCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattc < 2:772030‑M1/90‑61 (MQ=255) gtgtCATCAGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattc < 2:357369‑M1/90‑61 (MQ=255) atcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaa > 1:1015387‑M1/1‑25 (MQ=255) atcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgg > 1:162008‑M1/1‑25 (MQ=255) atcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgg < 2:162008‑M1/51‑27 (MQ=255) tcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcaca < 1:734533‑M1/73‑50 (MQ=255) tcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcaca > 2:734533‑M1/1‑24 (MQ=255) tcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggt > 1:209085‑M1/1‑24 (MQ=255) tcaGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggt < 2:209085‑M1/55‑32 (MQ=255) caGGCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaa < 2:307856‑M1/90‑68 (MQ=255) gCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacg > 2:1061655‑M1/1‑20 (MQ=255) gCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgc > 1:127279‑M1/1‑20 (MQ=255) gCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgc < 2:127279‑M1/66‑47 (MQ=255) gCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgc < 2:1053971‑M1/66‑47 (MQ=255) gCCAAAACTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgc > 1:1053971‑M1/1‑20 (MQ=255) gCCAAAACTCCGGTCGGCAAaagacgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacg > 1:300368‑M1/1‑20 (MQ=255) aaaCTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaagacgtgat < 1:20520‑M1/90‑75 (MQ=255) aaaCTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgat < 1:1061655‑M1/90‑75 (MQ=255) aaaCTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgat < 2:132490‑M1/90‑75 (MQ=255) aaaCTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgat > 2:143778‑M1/1‑16 (MQ=255) aaaCTCCGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgat < 1:972129‑M1/90‑75 (MQ=255) ccGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgatggtca > 1:1053827‑M1/1‑11 (MQ=255) ccGGTCGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgatggtca < 2:1097138‑M1/90‑80 (MQ=255) cGGCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgatggtcatgcgc < 2:102304‑M1/90‑85 (MQ=255) gCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgatggtcatgcgctg < 2:670713‑M1/90‑87 (MQ=255) gCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgatggtcatgcgctg < 1:687971‑M1/90‑87 (MQ=255) gCAAaagccgcctcatactcttttcctcgggaggttaccttgtttctcgcacaagaaattattcgtaaaaaacgtgatggtcatgcgctg < 1:496690‑M1/90‑87 (MQ=255) | GAAATTGATGGACCTGACCACCCTGAATGACGACGACACCGACGAGAAAGTGATCGCCCTGTGTCATCAGGCCAAAACTCCGGTCGGCAATACCGCCGCTATCTGTATCTATCCTCGCTTTATCCCGATTGCTCGCAAAACTCTGAAAGAGCAGGGCACCCCGGAAATCCGTATCG > NZ_CP009273/4607175‑4607350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |