| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4607264 | 3 (0.070) | 49 (1.300) | 29/160 | 0.1 | 85.4% | coding (125/780 nt) | deoC | deoxyribose‑phosphate aldolase |
| ? | NZ_CP009273 | 4608011 = | 14 (0.370) | intergenic (+92/‑35) | deoC/deoA | deoxyribose‑phosphate aldolase/thymidine phosphorylase | |||||
ATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG > NZ_CP009273/4607925‑4608096 | ttgatggacctgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAgc < 1:548592‑M2/4‑1 (MQ=255)ttgatggacctgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAgc < 2:309114‑M2/4‑1 (MQ=255) tgatggacctgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAgcc > 2:97874‑M2/86‑90 (MQ=255) tgatggacctgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAgcc < 2:520874‑M2/5‑1 (MQ=255) gatggacctgaccaccctgaatgacgacgacaccgatgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAgccg < 1:930005‑M2/6‑1 (MQ=255) gatggacctgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAgccg < 1:53130‑M2/6‑1 (MQ=255) gCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgccg < 1:376580/90‑1 (MQ=255) cTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgccgc > 1:767430/1‑90 (MQ=255) ttACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCt > 2:774577/1‑90 (MQ=255) cctgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCAt < 1:360799‑M2/12‑1 (MQ=255) gCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATa > 2:489084/1‑90 (MQ=255) tgaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATAc < 1:1027014‑M2/14‑1 (MQ=255) gaccaccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATAct > 2:351589‑M2/76‑90 (MQ=255) ccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCtttt > 1:1059630‑M2/71‑90 (MQ=255) ccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCtttt > 1:1098825‑M2/71‑90 (MQ=255) ccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCtttt > 2:1091705‑M2/71‑90 (MQ=255) ccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCtttt > 1:357369‑M2/71‑90 (MQ=255) ccctgaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCtttt < 1:476498‑M2/20‑1 (MQ=255) gaatgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTc > 1:102304‑M2/67‑90 (MQ=255) atgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCgg < 2:669232‑M2/26‑1 (MQ=255) atgacgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCgg < 1:814044‑M2/26‑1 (MQ=255) cgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAgg > 2:295508‑M2/61‑90 (MQ=255) cgacgacaccgacgagaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAgg > 1:528897‑M2/61‑90 (MQ=255) aCGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGtt > 1:385822/1‑90 (MQ=255) gaaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCg < 1:301597‑M2/45‑1 (MQ=255) aCGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCg > 1:368124/1‑90 (MQ=255) aaagtgatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGc < 2:317391‑M2/46‑1 (MQ=255) gTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgc < 1:843006/47‑1 (MQ=255) gTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAgc > 2:843006/1‑47 (MQ=255) gatcgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAg > 2:748811‑M2/40‑90 (MQ=255) aCCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGaa > 2:687971/1‑90 (MQ=255) cgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCttt > 1:586095‑M2/37‑55 (MQ=255) cgccctgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCttt < 2:586095‑M2/19‑1 (MQ=255) cGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAatt > 2:527865/1‑90 (MQ=255) cGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAatt > 2:438714/1‑90 (MQ=255) tgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAattatt > 1:493248‑M2/32‑90 (MQ=255) tgtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAattatt > 2:49058‑M2/32‑90 (MQ=255) gtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTc < 2:357369‑M2/60‑1 (MQ=255) gtgtcatcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTc < 2:772030‑M2/60‑1 (MQ=255) atcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCgg > 1:162008‑M2/26‑51 (MQ=255) atcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCgg < 2:162008‑M2/26‑1 (MQ=255) atcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTaaa > 1:1015387‑M2/26‑90 (MQ=255) tcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGt < 2:209085‑M2/31‑1 (MQ=255) tcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGt > 1:209085‑M2/25‑55 (MQ=255) tcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGcaca < 1:734533‑M2/49‑1 (MQ=255) tcaggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGcaca > 2:734533‑M2/25‑73 (MQ=255) caggccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTaaaaa < 2:307856‑M2/67‑1 (MQ=255) gccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGc > 1:1053971‑M2/21‑66 (MQ=255) gccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGc < 2:1053971‑M2/46‑1 (MQ=255) gccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGc > 1:127279‑M2/21‑66 (MQ=255) gccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGc < 2:127279‑M2/46‑1 (MQ=255) gccaaaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACg > 2:1061655‑M2/21‑90 (MQ=255) gccaaaactccggtcggcaaAAGACGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACg > 1:300368‑M2/21‑90 (MQ=255) aaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAGACGTGAt < 1:20520‑M2/74‑1 (MQ=255) aaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt < 1:1061655‑M2/74‑1 (MQ=255) aaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt > 2:143778‑M2/17‑90 (MQ=255) aaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt < 1:972129‑M2/74‑1 (MQ=255) aaactccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt < 2:132490‑M2/74‑1 (MQ=255) ccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCa < 2:1097138‑M2/79‑1 (MQ=255) ccggtcggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCa > 1:1053827‑M2/12‑90 (MQ=255) cATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCAt > 2:67285/1‑90 (MQ=255) aTCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt < 2:508493/83‑1 (MQ=255) aTCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGAt > 1:508493/1‑83 (MQ=255) cggcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATgcgc < 2:102304‑M2/84‑1 (MQ=255) gcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTg < 1:496690‑M2/86‑1 (MQ=255) gcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTg < 1:687971‑M2/86‑1 (MQ=255) gcaaAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTg < 2:670713‑M2/86‑1 (MQ=255) | ATGCTTTACGCCTGATGCGCTGCGCTTATCAGGCCTACGAGACGTATCTACCCGTAGGCCGGATAAGGCGTAGACGCATCCGGCAAAAGCCGCCTCATACTCTTTTCCTCGGGAGGTTACCTTGTTTCTCGCACAAGAAATTATTCGTAAAAAACGTGATGGTCATGCGCTG > NZ_CP009273/4607925‑4608096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |