| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4607025 | 10 (0.280) | 24 (0.670) | 16/168 | 0.6 | 75.1% | intergenic (‑143/‑115) | yjjI/deoC | YjjI family glycine radical enzyme/deoxyribose‑phosphate aldolase |
| ? | NZ_CP009273 | 4607462 = | 6 (0.170) | coding (323/780 nt) | deoC | deoxyribose‑phosphate aldolase | |||||
GTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGT > NZ_CP009273/4606936‑4607107 | gTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAAC > 1:235236‑M1/1‑90 (MQ=255) ttGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgct < 1:49871‑M1/90‑8 (MQ=255) tGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGt < 1:951476/90‑1 (MQ=255) gATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctga < 1:165829‑M1/90‑10 (MQ=255) cTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggc > 1:60715‑M1/1‑77 (MQ=255) gATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgg > 2:435883‑M1/1‑75 (MQ=255) gATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTc > 2:156819/1‑90 (MQ=255) gTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaac > 1:844952‑M1/1‑70 (MQ=255) gTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTaa > 2:948440/1‑90 (MQ=255) tttGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAAt < 1:330247/90‑1 (MQ=255) ttGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcggggaacgg > 2:443011‑M1/1‑68 (MQ=255) gCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagc < 2:137812‑M1/90‑25 (MQ=255) ccacTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggt < 2:315986‑M1/90‑29 (MQ=255) tcattTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagtaggttggttttgacct < 2:303855‑M1/90‑41 (MQ=255) tcattTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacct < 1:523325‑M1/90‑41 (MQ=255) aaaGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaa < 2:844952‑M1/90‑48 (MQ=255) aaaGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaa < 2:462684‑M1/90‑48 (MQ=255) aaaGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaa < 1:876852‑M1/90‑48 (MQ=255) attattTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGa < 2:492027/90‑1 (MQ=255) tttGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGtt < 1:339466/90‑1 (MQ=255) aaCCAGATCGCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggct > 2:609964‑M1/1‑28 (MQ=255) gATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTa > 1:328680/1‑90 (MQ=255) gctttataGTGATGCAAACgcgcgctgatggggggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggcttgcgcggca < 1:737035‑M1/87‑72 (MQ=255) gCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggcttgcgcggca < 2:500584‑M1/90‑72 (MQ=255) gCATTACAGTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggcttgcgcggca < 2:923834‑M1/90‑72 (MQ=255) gTGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggcttgcgcggcagcggatgt > 2:519224‑M1/1‑11 (MQ=255) gTGATGCAAACgcgcgctgatggcgggtaacgagcaggtt > 1:922257‑M1/1‑11 (MQ=255) gTGATGCAAACgcgcgctgatggcgggtaacgagcaggtt < 2:922257‑M1/40‑30 (MQ=255) tGATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggcttgcgcggcagcgaatgta < 1:614370‑M1/90‑81 (MQ=255) gATGCAAACgcgcgctgatggcgggtaacgagcaggttggttttgacctggtgaaagcctgtaaagaggcttgcgcggcagcgaatgtac > 2:311307‑M1/1‑9 (MQ=255) gATGCAAACgcgcgctgatggcgggtaacgagcaggtt < 2:624309‑M1/38‑30 (MQ=255) gATGCAAACgcgcgctgatggcgggtaacgagcaggtt > 1:624309‑M1/1‑9 (MQ=255) gATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAgg > 1:776696/1‑90 (MQ=255) aTGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGt > 1:524970/1‑90 (MQ=255) aTGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGt > 2:899109/1‑90 (MQ=255) | GTTCACTTTGATCCTGATGCGTTTGCCACCACTGACGCATTCATTTGAAAGTGAATTATTTGAACCAGATCGCATTACAGTGATGCAAACTTGTAAGTAGATTTCCTTAATTGTGATGTGTATCGAAGTGTGTTGCGGAGTAGATGTTAGAATACTAACAAACTCGCAAGGT > NZ_CP009273/4606936‑4607107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |