Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,092,014 3461 bp→GCATGCGGATCCTCTAGAGTCGACATATG [rhaD]–rhaB [rhaD], rhaA, rhaB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4092014 4095474 3461 266 [0] [0] 277 [rhaD]–rhaB [rhaD],rhaA,rhaB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40920130 (0.000)187 (0.890)
+GCATGCGGATCCTCTAGAGTCGACATATG		 91/140 0.5 100% coding (283/825 nt) rhaD rhamnulose‑1‑phosphate aldolase
?NC_000913 4095475 = 0 (0.000)intergenic (‑4/‑284) rhaB/rhaS rhamnulokinase/DNA‑binding transcriptional activator for rhaBAD and rhaT, L‑rhamnose‑binding

Only 100 of 350 total aligned reads displayed.

TCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4091916‑4092013
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAA  >  NC_000913/4095475‑4095573
                                                                                                  |||||||||||||||||||||||||||||                                                                                                   
   CAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATG                                                                                                                             <  2:3909073/100‑1
       GGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGA                                                                                                                         >  2:721237/1‑100
       GGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGA                                                                                                                         >  1:7088960/1‑100
        GGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGAT                                                                                                                        >  1:5120407/1‑100
        GGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGGGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGAT                                                                                                                        >  2:5559297/1‑100
         GAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATC                                                                                                                       <  1:4340221/100‑1
          AAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCC                                                                                                                      >  2:5984349/1‑100
          AAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCC                                                                                                                      >  1:2163494/1‑100
            AGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTC                                                                                                                    <  1:106098/100‑1
            AGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTC                                                                                                                    >  2:6927878/1‑100
            AGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTC                                                                                                                    >  1:960134/1‑100
             GGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCT                                                                                                                   <  2:2632349/100‑1
                AGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGA                                                                                                                >  1:4216254/1‑100
                  TGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGT                                                                                                              >  1:5554443/1‑100
                  TGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGT                                                                                                              >  1:3873351/1‑100
                  TGAGCCGGAAGTTCGGAAGCGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGT                                                                                                              >  2:4617350/1‑100
                   GAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTC                                                                                                             >  1:181361/1‑100
                      CCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGAC                                                                                                          >  1:1720340/1‑100
                        GGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGTCGTCGCTGTCGACGCATGCGGATCATCTAGAGACGACAT                                                                                                        >  2:3815391/1‑100
                         GAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATA                                                                                                       <  2:2344687/100‑1
                             TTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGT                                                                                                   <  1:4074117/100‑1
                                 GAAGTGGGGACCGCTTCGTTGGTTAACCCCCAAAGAAAGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATC                                                                                               <  2:5487883/100‑1
                                    GTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTG                                                                                            >  2:6693689/1‑100
                                    GTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTG                                                                                            >  1:3359244/1‑100
                                     TGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGC                                                                                           >  1:6794902/1‑100
                                     TGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGC                                                                                           <  2:1074828/100‑1
                                     TGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGC                                                                                           <  1:1238628/100‑1
                                     TGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGC                                                                                           >  1:1338077/1‑100
                                           CGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATT                                                                                     >  1:3642732/1‑100
                                           CGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATT                                                                                     <  1:2591822/100‑1
                                            GGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTT                                                                                    <  2:6673482/100‑1
                                               TTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCAT                                                                                 <  1:5260626/100‑1
                                                 CGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTA                                                                               <  1:3284259/100‑1
                                                 CGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTA                                                                               <  1:6451252/100‑1
                                                  GTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTAC                                                                              <  1:4534518/100‑1
                                                   TTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACG                                                                             >  1:4724420/1‑100
                                                   TTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACG                                                                             >  2:4827674/1‑100
                                                   TTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACG                                                                             >  1:3459057/1‑100
                                                   TTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACG                                                                             >  2:706893/1‑100
                                                   TTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACG                                                                             >  2:1232579/1‑100
                                                     GGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGAC                                                                           >  1:358489/1‑100
                                                     GGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGAC                                                                           >  1:6929878/1‑100
                                                      GTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACC                                                                          >  2:1539268/1‑100
                                                      GTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACC                                                                          >  1:1988407/1‑100
                                                       TTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCA                                                                         >  1:234181/1‑100
                                                       TTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCA                                                                         <  1:839632/100‑1
                                                       TTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCA                                                                         >  1:4393048/1‑100
                                                       TTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAAAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCA                                                                         >  1:5881568/1‑100
                                                          ACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTC                                                                      <  1:1505255/100‑1
                                                           CCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCT                                                                     <  2:2759758/100‑1
                                                           CCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCT                                                                     >  1:3172746/1‑100
                                                             CCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAA                                                                   <  2:5995618/100‑1
                                                              CCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAA                                                                  <  2:1618141/100‑1
                                                                AAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAA                                                                >  1:6138524/1‑100
                                                                 AAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAG                                                               >  1:6010874/1‑100
                                                                   GAATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCG                                                             >  2:4067992/1‑100
                                                                    AATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGC                                                            <  2:3169912/100‑1
                                                                     ATGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCC                                                           <  1:6046098/100‑1
                                                                      TGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCT                                                          <  2:1337673/100‑1
                                                                      TGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCT                                                          >  2:1786831/1‑100
                                                                      TGTGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCT                                                          >  2:2154054/1‑100
                                                                        TGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGA                                                        >  1:2769594/1‑100
                                                                        TGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGA                                                        >  2:5177997/1‑100
                                                                        TGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGA                                                        <  2:2288051/100‑1
                                                                        TGGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGA                                                        >  1:6616355/1‑100
                                                                         GGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAA                                                       <  1:1002563/100‑1
                                                                         GGTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAA                                                       >  2:5288013/1‑100
                                                                          GTAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAAT                                                      >  2:6457780/1‑100
                                                                           TAGCCCGCGCCGTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATT                                                     <  2:2522033/100‑1
                                                                                      GTCGCTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCT                                          <  2:842438/100‑1
                                                                                          CTGTCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTT                                      <  2:308525/100‑1
                                                                                             TCGACGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACT                                   >  2:2415273/1‑100
                                                                                                 CGCATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACA                               >  2:926882/1‑100
                                                                                                   CATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGG                             <  1:2794802/100‑1
                                                                                                   CATGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGG                             <  1:3706148/100‑1
                                                                                                     TGCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAA                           >  2:4249284/1‑100
                                                                                                      GCGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAA                          >  1:375340/1‑100
                                                                                                       CGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAA                         >  1:888726/1‑100
                                                                                                       CGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAA                         <  2:2809939/100‑1
                                                                                                       CGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAA                         <  1:2990850/100‑1
                                                                                                       CGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAA                         <  1:5350264/100‑1
                                                                                                       CGGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCAAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAA                         <  2:6160301/100‑1
                                                                                                        GGATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAAT                        <  1:487135/100‑1
                                                                                                         GATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATG                       >  2:5854326/1‑100
                                                                                                          ATCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGG                      >  2:6424687/1‑100
                                                                                                           TCCTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGG                     >  1:6351275/1‑100
                                                                                                             CTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCC                   >  2:1953641/1‑100
                                                                                                             CTCTAGAGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCC                   <  2:3057441/100‑1
                                                                                                                   AGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGC             <  1:4295257/100‑1
                                                                                                                   AGTCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGC             <  2:4216254/100‑1
                                                                                                                     TCGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAA           <  2:6111206/100‑1
                                                                                                                      tgtCATTTGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAC          <  2:6767768/97‑1
                                                                                                                      CGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAC          <  2:5889430/100‑1
                                                                                                                      CGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAC          <  1:2427999/100‑1
                                                                                                                      CGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAC          <  2:2885849/100‑1
                                                                                                                      CGACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGACTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAC          <  2:3543646/100‑1
                                                                                                                       GACATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACC         <  1:4994625/100‑1
                                                                                                                         CATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAG       >  2:2077726/1‑100
                                                                                                                         CATATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAG       >  2:4456279/1‑100
                                                                                                                            ATGGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGA    >  1:3041970/1‑100
                                                                                                  |||||||||||||||||||||||||||||                                                                                                   
TCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4091916‑4092013
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAA  >  NC_000913/4095475‑4095573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.