BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,092,014	3461 bp→GCATGCGGATCCTCTAGAGTCGACATATG		[rhaD]–rhaB	[rhaD], rhaA, rhaB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4092014	4095474	3461	266 [0]	[0] 277	[rhaD]–rhaB	[rhaD],rhaA,rhaB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4092013	0 (0.000)	187 (0.890) +GCATGCGGATCCTCTAGAGTCGACATATG	91/140	0.5	100%	coding (283/825 nt)	rhaD	rhamnulose‑1‑phosphate aldolase
*	?	NC_000913	4095475 =	0 (0.000)	187 (0.890) +GCATGCGGATCCTCTAGAGTCGACATATG	91/140	0.5	100%	intergenic (‑4/‑284)	rhaB/rhaS	rhamnulokinase/DNA‑binding transcriptional activator for rhaBAD and rhaT, L‑rhamnose‑binding

Only 100 of 278 total aligned reads displayed.

CAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAG  >  NC_000913/4095376‑4095574

gttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgg                                                                                                     >  2:4299232‑M2/100‑100 (MQ=255)

gttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgg                                                                                                     <  1:4383904‑M2/1‑1 (MQ=255)

 ttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGt                                                                                                    >  1:926355‑M2/99‑100 (MQ=255)

 ttcggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGt                                                                                                    <  1:4074117‑M2/2‑1 (MQ=255)

    ggaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGAt                                                                                                 <  1:4709829‑M2/5‑1 (MQ=255)

     gaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATc                                                                                                >  1:1814914‑M2/95‑100 (MQ=255)

     gaagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatactctagagtcgacatatgGTGATc                                                                                                >  2:6115610‑M2/95‑100 (MQ=255)

      aagtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATcc                                                                                               <  2:2848325‑M2/7‑1 (MQ=255)

       agtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCct                                                                                              >  2:3884114‑M2/93‑100 (MQ=255)

        gtggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgcgatatgGTGATCctg                                                                                             >  2:562595‑M2/92‑100 (MQ=255)

         tggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgc                                                                                            <  1:1238628‑M2/10‑1 (MQ=255)

         tggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgc                                                                                            <  2:1074828‑M2/10‑1 (MQ=255)

         tggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgc                                                                                            >  1:1338077‑M2/91‑100 (MQ=255)

          ggggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgct                                                                                           <  1:3224614‑M2/11‑1 (MQ=255)

           gggacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCctgctg                                                                                          >  2:3276946‑M2/89‑100 (MQ=255)

             gacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGaa                                                                                        <  2:2334000‑M2/14‑1 (MQ=255)

             gacggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGaa                                                                                        <  2:6255493‑M2/14‑1 (MQ=255)

              acggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAAt                                                                                       <  2:5991508‑M2/15‑1 (MQ=255)

               cggcttcgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAAtt                                                                                      >  1:3642732‑M2/85‑100 (MQ=255)

                     cgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTa                                                                                <  2:4238336‑M2/22‑1 (MQ=255)

                     cgttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTa                                                                                <  1:6451252‑M2/22‑1 (MQ=255)

                       ttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACg                                                                              >  1:7084250‑M2/77‑100 (MQ=255)

                       ttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACg                                                                              >  1:2361453‑M2/77‑100 (MQ=255)

                       ttggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACg                                                                              >  1:4331707‑M2/77‑100 (MQ=255)

                         ggttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGAc                                                                            >  1:358489‑M2/75‑100 (MQ=255)

                           ttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCa                                                                          >  1:5342422‑M2/73‑100 (MQ=255)

                           ttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCa                                                                          <  1:839632‑M2/28‑1 (MQ=255)

                           ttaacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctaaagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCa                                                                          >  1:5881568‑M2/73‑100 (MQ=255)

                            taccccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAg                                                                         <  1:2033763‑M2/29‑1 (MQ=255)

                             aacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGt                                                                        <  1:383926‑M2/30‑1 (MQ=255)

                             aacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGt                                                                        >  1:1453122‑M2/71‑100 (MQ=255)

                             aacccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGt                                                                        <  1:6086716‑M2/30‑1 (MQ=255)

                              acccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTc                                                                       <  2:55312‑M2/31‑1 (MQ=255)

                               cccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCt                                                                      <  2:2759758‑M2/32‑1 (MQ=255)

                               cccccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCt                                                                      <  2:305847‑M2/32‑1 (MQ=255)

                                 cccaaagaatttggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaa                                                                    <  2:6495193‑M2/34‑1 (MQ=255)

                                 cccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaa                                                                    >  2:5376786‑M2/67‑100 (MQ=255)

                                  ccaaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaaa                                                                   <  2:128400‑M2/35‑1 (MQ=255)

                                   caaagcatgtggtagcccgcgccggcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaaaa                                                                  <  1:3315191‑M2/36‑1 (MQ=255)

                                    aaagaatgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTaaaaa                                                                 >  1:6138524‑M2/64‑100 (MQ=255)

                                          tgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCt                                                           >  2:7144370‑M2/58‑100 (MQ=255)

                                          tgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCt                                                           >  2:3730920‑M2/58‑100 (MQ=255)

                                          tgtggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCt                                                           >  2:1786831‑M2/58‑100 (MQ=255)

                                            tggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGa                                                         >  1:6616355‑M2/56‑100 (MQ=255)

                                             ggtagcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGaa                                                        <  1:1002563‑M2/46‑1 (MQ=255)

                                                agcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTc                                                     <  2:1215080‑M2/49‑1 (MQ=255)

                                                 gcccgcgccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTcg                                                    <  2:2457596‑M2/50‑1 (MQ=255)

                                                       gccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCt                                              <  2:4048056‑M2/56‑1 (MQ=255)

                                                       gccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCt                                              <  1:228275‑M2/56‑1 (MQ=255)

                                                        ccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCtt                                             >  2:4126271‑M2/44‑100 (MQ=255)

                                                        ccgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCtt                                             >  1:4780070‑M2/44‑100 (MQ=255)

                                                         cgtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtc                                            <  1:5672331‑M2/58‑1 (MQ=255)

                                                          gtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtct                                           <  2:842438‑M2/59‑1 (MQ=255)

                                                          gtcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTtct                                           <  2:6682038‑M2/59‑1 (MQ=255)

                                                           tcgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCT‑AAAAGCGCCTGAATTCGCGACCTTCTCg                                         >  2:4485157‑M2/41‑100 (MQ=255)

                                                            cgctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCg                                         >  1:2749515‑M2/40‑100 (MQ=255)

                                                             gctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGt                                        >  1:4449614‑M2/39‑100 (MQ=255)

                                                             gctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGt                                        <  1:1761731‑M2/62‑1 (MQ=255)

                                                              ctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGtt                                       <  1:6893884‑M2/63‑1 (MQ=255)

                                                              ctgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGtt                                       >  2:4848272‑M2/38‑100 (MQ=255)

                                                               tgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTa                                      <  1:5195062‑M2/64‑1 (MQ=255)

                                                               tgtcgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTa                                      >  2:6070924‑M2/37‑100 (MQ=255)

                                                               tgtcaacgcatgcggatcctctagagtcgacatatgGTGATCCTGCCGAATTTCATTACGATCAGTCTAAAAGGCTCCTGAATTCGCGGCCTTCTCGTTa                                      <  2:1431687‑M2/64‑1 (MQ=255)

                                                                  cgacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTg                                   <  2:5871158‑M2/67‑1 (MQ=255)

                                                                   gacgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGa                                  >  1:3396111‑M2/33‑100 (MQ=255)

                                                                    acgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGAc                                 <  1:414358‑M2/69‑1 (MQ=255)

                                                                    acgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGAc                                 >  2:4719022‑M2/32‑100 (MQ=255)

                                                                     cgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACa                                >  2:5272910‑M2/31‑100 (MQ=255)

                                                                     cgcatgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACa                                >  2:926882‑M2/31‑100 (MQ=255)

                                                                       catgcggatcctctagagtcgccatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAgg                              <  2:1689748‑M2/72‑1 (MQ=255)

                                                                       catgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAgg                              <  1:2794802‑M2/72‑1 (MQ=255)

                                                                       catgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAgg                              <  1:3706148‑M2/72‑1 (MQ=255)

                                                                        atgcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGa                             >  2:2192819‑M2/28‑100 (MQ=255)

                                                                          gcggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGaaa                           >  1:375340‑M2/26‑100 (MQ=255)

                                                                           cggatcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGaaaa                          >  1:2580792‑M2/25‑100 (MQ=255)

                                                                              atcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATgg                       >  2:5952308‑M2/22‑100 (MQ=255)

                                                                              atcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATgg                       >  2:6424687‑M2/22‑100 (MQ=255)

                                                                               tcctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATggg                      >  1:6351275‑M2/21‑100 (MQ=255)

                                                                                 ctctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAACTGGGcc                    >  2:236802‑M2/19‑100 (MQ=255)

                                                                                  tctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCa                   <  1:6041746‑M2/83‑1 (MQ=255)

                                                                                   ctagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCAt                  >  2:2806387‑M2/17‑100 (MQ=255)

                                                                                    tagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCAtt                 >  2:2587228‑M2/16‑100 (MQ=255)

                                                                                    tagagtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCAtt                 <  2:3096012‑M2/85‑1 (MQ=255)

                                                                                         tcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCaa            <  1:3472447‑M2/90‑1 (MQ=255)

                                                                                          tgtcatttgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAc           <  2:6767768‑M2/91‑1 (MQ=255)

                                                                                          cgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAc           <  1:2427999‑M2/91‑1 (MQ=255)

                                                                                          cgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGACTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAc           <  2:3543646‑M2/91‑1 (MQ=255)

                                                                                           gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAAcc          <  1:4994625‑M2/92‑1 (MQ=255)

                                                                                             catatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAg        >  1:5355475‑M2/7‑100 (MQ=255)

                                                                                             catatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAg        >  2:1993061‑M2/7‑100 (MQ=255)

                                                                                              atatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAgg       <  1:3075830‑M2/95‑1 (MQ=255)

                                                                                               tatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAggg      <  2:1600278‑M2/96‑1 (MQ=255)

                                                                                               tatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAggg      >  2:300629‑M2/5‑100 (MQ=255)

                                                                                                atgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGa     <  2:6709253‑M2/97‑1 (MQ=255)

                                                                                                atgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGa     >  1:3041970‑M2/4‑100 (MQ=255)

                                                                                                 tgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGaa    >  1:4962891‑M2/3‑100 (MQ=255)

                                                                                                 tgGGGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGTGCCTGAATTCGCGGCCTTCTCGTTACTGAAAGTTAAATGGGCCATGGGCAGCCAGGGaa    >  2:2151836‑M2/3‑100 (MQ=255)

                                                                                                   gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAg  >  1:5953634/1‑100 (MQ=255)

                                                                                                   gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAg  >  1:6824060/1‑100 (MQ=255)

                                                                                                   gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAg  >  2:7054738/1‑100 (MQ=255)

CAGCGTCAGGCTGCGGCATTCACGCTCGTAACGCGCCAGCATCACGCGCCCACTGGATGCGCCGAGATCGACGGCGACACAATTGCGAAAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAG  >  NC_000913/4095376‑4095574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`