BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	4,092,014	3461 bp→GCATGCGGATCCTCTAGAGTCGACATATG		[rhaD]–rhaB	[rhaD], rhaA, rhaB

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4092014	4095474	3461	266 [0]	[0] 277	[rhaD]–rhaB	[rhaD],rhaA,rhaB

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4092013	0 (0.000)	187 (0.890) +GCATGCGGATCCTCTAGAGTCGACATATG	91/140	0.5	100%	coding (283/825 nt)	rhaD	rhamnulose‑1‑phosphate aldolase
*	?	NC_000913	4095475 =	0 (0.000)	187 (0.890) +GCATGCGGATCCTCTAGAGTCGACATATG	91/140	0.5	100%	intergenic (‑4/‑284)	rhaB/rhaS	rhamnulokinase/DNA‑binding transcriptional activator for rhaBAD and rhaT, L‑rhamnose‑binding

Only 100 of 266 total aligned reads displayed.

TCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACTTTTACGATGCCTAAGTTAGCCGCAGGATCAAGCTGGACGTTACGGAAGAATTTGCCCGAGCCGGTGACAATAAACGGTGTATTTGCCAGTAAAGGCAT  >  NC_000913/4091916‑4092112

tCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgc                                                                                                   >  1:1041370‑M1/1‑98 (MQ=255)

tCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgc                                                                                                   >  2:2537698‑M1/1‑98 (MQ=255)

tCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgc                                                                                                   >  1:2778509‑M1/1‑98 (MQ=255)

  gCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcat                                                                                                 >  1:3550616‑M1/1‑96 (MQ=255)

        ggAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggat                                                                                           >  1:5120407‑M1/1‑90 (MQ=255)

         gAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatc                                                                                          <  2:3524176‑M1/100‑12 (MQ=255)

         gAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatc                                                                                          <  1:4340221‑M1/100‑12 (MQ=255)

          aaaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcc                                                                                         <  1:1530928‑M1/100‑13 (MQ=255)

          aaaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcc                                                                                         >  2:5984349‑M1/1‑88 (MQ=255)

           aaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcct                                                                                        >  2:1855127‑M1/1‑87 (MQ=255)

           aaGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcct                                                                                        >  1:6689361‑M1/1‑87 (MQ=255)

            aGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctc                                                                                       >  1:6582482‑M1/1‑86 (MQ=255)

            aGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctc                                                                                       >  1:3290024‑M1/1‑86 (MQ=255)

            aGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctc                                                                                       >  2:6927878‑M1/1‑86 (MQ=255)

             ggAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctct                                                                                      >  1:4222872‑M1/1‑85 (MQ=255)

             ggAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctct                                                                                      <  2:2066980‑M1/100‑16 (MQ=255)

              gAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctcta                                                                                     >  2:7047398‑M1/1‑84 (MQ=255)

                aGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctaga                                                                                   <  1:283267‑M1/100‑19 (MQ=255)

                  tGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                                 <  2:110777‑M1/100‑21 (MQ=255)

                  tGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                                 >  1:3873351‑M1/1‑80 (MQ=255)

                  tGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                                 >  1:5554443‑M1/1‑80 (MQ=255)

                  tGAGCCGGAAGTTCGGAAGCGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagt                                                                                 >  2:4617350‑M1/1‑80 (MQ=255)

                   gAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtc                                                                                <  1:4454974‑M1/100‑22 (MQ=255)

                   gAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtc                                                                                >  1:181361‑M1/1‑79 (MQ=255)

                     gCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcga                                                                              <  2:1033177‑M1/100‑24 (MQ=255)

                      ccGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgac                                                                             >  1:1720340‑M1/1‑76 (MQ=255)

                       cGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgaca                                                                            <  2:1490836‑M1/100‑26 (MQ=255)

                        ggAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacat                                                                           >  2:5864179‑M1/1‑74 (MQ=255)

                         gAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacata                                                                          >  1:3032306‑M1/1‑73 (MQ=255)

                         gAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacata                                                                          <  2:2344687‑M1/100‑28 (MQ=255)

                          aaGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCAAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatat                                                                         >  2:3075830‑M1/1‑72 (MQ=255)

                           aGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatg                                                                        >  1:5082729‑M1/1‑71 (MQ=255)

                           aGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatg                                                                        >  1:1179258‑M1/1‑71 (MQ=255)

                             ttCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggt                                                                      >  1:926355‑M1/1‑69 (MQ=255)

                             ttCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggt                                                                      <  1:4074117‑M1/100‑32 (MQ=255)

                                ggAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgat                                                                   <  2:3999694‑M1/100‑35 (MQ=255)

                                  aaGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcc                                                                 <  2:2848325‑M1/100‑37 (MQ=255)

                                   aGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcct                                                                >  2:3884114‑M1/1‑63 (MQ=255)

                                    gTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctg                                                               >  1:3359244‑M1/1‑62 (MQ=255)

                                    gTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctg                                                               >  2:1599566‑M1/1‑62 (MQ=255)

                                     tGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgc                                                              <  1:1238628‑M1/100‑40 (MQ=255)

                                     tGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgc                                                              >  1:1338077‑M1/1‑61 (MQ=255)

                                      ggggACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgct                                                             <  1:626218‑M1/100‑41 (MQ=255)

                                         gACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaa                                                          <  2:2334000‑M1/100‑44 (MQ=255)

                                         gACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaa                                                          <  2:6255493‑M1/100‑44 (MQ=255)

                                          aCGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaat                                                         <  2:5991508‑M1/100‑45 (MQ=255)

                                           cGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatt                                                        <  1:2591822‑M1/100‑46 (MQ=255)

                                           cGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatt                                                        >  1:3642732‑M1/1‑55 (MQ=255)

                                            ggCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaattt                                                       <  2:6673482‑M1/100‑47 (MQ=255)

                                              cTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttca                                                     >  2:5618895‑M1/1‑52 (MQ=255)

                                               ttCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcat                                                    <  1:5260626‑M1/100‑50 (MQ=255)

                                                  gTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattac                                                 >  1:5342534‑M1/1‑48 (MQ=255)

                                                   ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacg                                                >  2:2691181‑M1/1‑47 (MQ=255)

                                                   ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacg                                                >  1:7104079‑M1/1‑47 (MQ=255)

                                                   ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacg                                                >  1:4331707‑M1/1‑47 (MQ=255)

                                                   ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacg                                                >  2:4827674‑M1/1‑47 (MQ=255)

                                                   ttGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacg                                                >  1:3459057‑M1/1‑47 (MQ=255)

                                                     ggTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgac                                              >  1:842438‑M1/1‑45 (MQ=255)

                                                      gTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgacc                                             >  1:3774607‑M1/1‑44 (MQ=255)

                                                      gTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgacc                                             >  1:1988407‑M1/1‑44 (MQ=255)

                                                       ttAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgacca                                            >  1:4393048‑M1/1‑43 (MQ=255)

                                                       ttAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctaaagtcgacatatggtgatcctgctgaatttcattacgacca                                            >  1:5881568‑M1/1‑43 (MQ=255)

                                                        taccccccaaaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccag                                           <  1:2033763‑M1/97‑59 (MQ=255)

                                                        tAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccag                                           >  2:6409770‑M1/1‑42 (MQ=255)

                                                        tAACCCCCAAAGAATGTGGTAGCCCGCGCCGGCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccag                                           <  2:796456‑M1/100‑59 (MQ=255)

                                                         aaCCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagt                                          <  1:6086716‑M1/100‑60 (MQ=255)

                                                          aCCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtc                                         <  2:55312‑M1/100‑61 (MQ=255)

                                                             cccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaa                                      >  2:5376786‑M1/1‑37 (MQ=255)

                                                              ccAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaa                                     <  2:128400‑M1/100‑65 (MQ=255)

                                                               cAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaa                                    <  2:6689361‑M1/100‑66 (MQ=255)

                                                                aaaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaa                                   >  2:863933‑M1/1‑34 (MQ=255)

                                                                 aaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaag                                  >  1:6010874‑M1/1‑33 (MQ=255)

                                                                 aaGAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaag                                  >  1:327097‑M1/1‑33 (MQ=255)

                                                                   gAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcg                                >  2:4067992‑M1/1‑31 (MQ=255)

                                                                   gAATGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcg                                >  1:2325513‑M1/1‑31 (MQ=255)

                                                                    aaTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagctc                               >  2:6764260‑M1/1‑30 (MQ=255)

                                                                    aaTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgc                               <  2:3169912‑M1/100‑71 (MQ=255)

                                                                     aTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcc                              >  1:6432987‑M1/1‑29 (MQ=255)

                                                                     aTGTGGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcc                              <  1:706893‑M1/100‑72 (MQ=255)

                                                                      tgtgGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcct                             >  2:7144370‑M1/1‑28 (MQ=255)

                                                                      tgtgGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcct                             >  2:3730920‑M1/1‑28 (MQ=255)

                                                                      tgtgGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcct                             <  1:370336‑M1/100‑73 (MQ=255)

                                                                        tgGTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctga                           >  2:5177997‑M1/1‑26 (MQ=255)

                                                                         nntagCCCNCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatgnngatcctgctgaatttcattacgaccagtctaaaaagcgcctgaa                          <  2:172776‑M1/98‑76 (MQ=255)

                                                                         ggTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaa                          <  1:1002563‑M1/100‑76 (MQ=255)

                                                                          gTAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaat                         >  2:6457780‑M1/1‑24 (MQ=255)

                                                                           tAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaatt                        <  1:4617350‑M1/100‑78 (MQ=255)

                                                                           tAGCCCGCGCCGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaatt                        <  2:2522033‑M1/100‑78 (MQ=255)

                                                                                    ccGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagtgcctgaattcgcgacctt               <  1:4775457‑M1/100‑87 (MQ=255)

                                                                                    ccGTCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgacctt               >  1:4126614‑M1/1‑14 (MQ=255)

                                                                                       tCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaagcgcctgaattcgcgaccttctcg            >  2:4485157‑M1/1‑11 (MQ=255)

                                                                                       tCGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctc            >  2:6075333‑M1/1‑11 (MQ=255)

                                                                                        cGCTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcg           >  1:2749515‑M1/1‑10 (MQ=255)

                                                                                        cGCTGTCGACgcatgcggatcctctagaggcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcg           <  1:2381518‑M1/100‑91 (MQ=255)

                                                                                          cTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgtt         >  2:4246998‑M1/1‑8 (MQ=255)

                                                                                          cTGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgtt         <  1:6893884‑M1/100‑93 (MQ=255)

                                                                                           tGTCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgtta        <  2:932888‑M1/100‑94 (MQ=255)

                                                                                             tctacgcatgcgtatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgccaccttctcgttact      <  2:2165588‑M1/97‑96 (MQ=255)

                                                                                             tCGACgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttact      >  2:2415273‑M1/1‑5 (MQ=255)

                                                                                                 cgcatgcggatcctctagagtcgacatatggtgatcctgctgaatttcattacgaccagtctaaaaagcgcctgaattcgcgaccttctcgttactgaca  >  2:5272910‑M1/1‑1 (MQ=255)

TCGCAGTGGGAAAGGAAGTGAGCCGGAAGTTCGGAAGTGGGGACGGCTTCGTTGGTTAACCCCCAAAGAATGTGGTAGCCCGCGCCGTCGCTGTCGACTTTTACGATGCCTAAGTTAGCCGCAGGATCAAGCTGGACGTTACGGAAGAATTTGCCCGAGCCGGTGACAATAAACGGTGTATTTGCCAGTAAAGGCAT  >  NC_000913/4091916‑4092112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`