BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC JC	NC_000913	1,042,085	IS2 (+) +5 bp	14.6%	coding (2122‑2126/2181 nt)	etk ←	tyrosine‑protein kinase, role in O‑antigen capsule formation

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	381260 =	NA (NA)	19 (0.200)	13/262	NT	19.4%	noncoding (1/1331 nt)	IS2	repeat region
*	?	NC_000913	= 1042089	76 (0.830)	19 (0.200)	13/262	NT	19.4%	coding (2122/2181 nt)	etk	tyrosine‑protein kinase, role in O‑antigen capsule formation
*	?	NC_000913	1042085 =	76 (0.830)	7 (0.070)	7/262	NT	8.1%	coding (2126/2181 nt)	etk	tyrosine‑protein kinase, role in O‑antigen capsule formation
*	?	NC_000913	= 1651548	NA (NA)	7 (0.070)	7/262	NT	8.1%	noncoding (706/706 nt)	IS2	repeat region

Only 100 of 111 total aligned reads displayed.

TTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAA  >  NC_000913/1041937‑1042225

ttACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCgg                                                                                                                                              <  7:157050/149‑1 (MQ=255)

           gcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGt                                                                                                                                   <  3:55820‑M1/12‑1 (MQ=255)

            tctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTACTAGTTATAGCCGTAACTGTAAGCggg                                                                                                                                             <  5:290876/138‑2 (MQ=255)

            tctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGt                                                                                                                                             >  6:290876/1‑138 (MQ=255)

            tctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGt                                                                                                                                             >  6:290878/1‑138 (MQ=255)

            tctGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGt                                                                                                                                             <  5:290878/138‑1 (MQ=255)

              tGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGtt                                                                                                                                  <  3:35190/147‑1 (MQ=255)

                      atgaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATcaca                                                                                                                          <  7:76530/147‑1 (MQ=255)

                      atgaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCacac                                                                                                                         <  2:329959/148‑1 (MQ=255)

                        gaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCAt                                                                                                                      >  8:413366/1‑149 (MQ=255)

                        gaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCAt                                                                                                                      >  7:418841/1‑149 (MQ=255)

                        gaCAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGGAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCAt                                                                                                                      >  1:222655/1‑149 (MQ=255)

                         gcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag                                                                                                                                              <  4:228071‑M1/1‑1 (MQ=255)

                         gcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGACGCGTTTAATCACACCAtt                                                                                                                     <  7:76509‑M1/26‑1 (MQ=255)

                         gcattataacgaatggcatccgcatagtgcgctgggttagcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag                                                                                                                                              >  3:228071‑M1/124‑124 (MQ=255)

                         aCAAACGAAGACCTGTCTAATGCGTAGACCGGAAAAGGCGATCACGCCGCATCCGGCCACTTTCAGTTTTACTCGTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGCTGCTGGCGCGTTTAATCACACCAtt                                                                                                                     <  5:126118/149‑1 (MQ=255)

                           aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc                                                                                                                     <  3:278795‑M2/147‑22 (MQ=255)

                           aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc                                                                                                                     <  2:143835‑M2/147‑22 (MQ=255)

                           aaaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGa                                                                                                                   <  6:120747/149‑1 (MQ=255)

                            aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAg                                                                                                                  <  3:322801/149‑1 (MQ=255)

                            aaCGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCATTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAg                                                                                                                  <  7:308257/149‑1 (MQ=255)

                               gaagaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagac                                                                                                                <  6:366012‑M2/148‑27 (MQ=255)

                               gaagaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGACGCGTTTAATCACACCATTGAGGa                                                                                                                >  3:398829/1‑148 (MQ=255)

                                 agaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATACCCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAg                                                                                                             >  5:85020/1‑149 (MQ=255)

                                  gaaCTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAgc                                                                                                            <  2:104249/149‑1 (MQ=255)

                                        tCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCtt                                                                                                       >  2:63098/1‑148 (MQ=255)

                                           aaTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcact                                                                                                   <  1:358220‑M2/149‑40 (MQ=255)

                                           aaTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcact                                                                                                   <  5:428281‑M2/149‑40 (MQ=255)

                                           aaTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTaa                                                                                                    >  6:382759/1‑148 (MQ=255)

                                            aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTaa                                                                                                    <  2:45796/147‑1 (MQ=255)

                                            aTGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAata                                                                                                  <  4:347077/149‑1 (MQ=255)

                                               cGTAGACCGGAAAAGGCGTTTACGCCGCATCCGGCCAGTTTCTGTTTTACTCTTTCTGGGAGTATCTATAAGGGTATTTGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTATTCACACCATTGTGGATAGCGGCTTTTATAtt                                                                                                <  6:85020/148‑1 (MQ=255)

                                                gTAGACCGGAAAAGGGGTTCACGCCGCTTCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTATTAGTTATAGCCGTTACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGACTTTAATATTGa                                                                                              >  3:82686/1‑149 (MQ=255)

                                                gTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTGTTTCTCGGAGGAACTATAACCGGAATAGTTATAGCCGTAACTTTAAGCGGTGCTGGCGCGTGTTATCACTCCATTGAGTATAGCGCCGTTAATATTGa                                                                                              >  1:157474/1‑149 (MQ=255)

                                                gTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctc                                                                                                                     <  8:368683‑M2/126‑22 (MQ=255)

                                                gTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGACGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGa                                                                                              <  4:398829/149‑1 (MQ=255)

                                                 tAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGAc                                                                                             <  7:413366/149‑1 (MQ=255)

                                                   gACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgc                                                                                           <  1:227877/149‑1 (MQ=255)

                                                        gAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTTATCACACCATTGAGGATAGCGCCTTTAATATTGACgcctgcc                                                                                      >  7:92117/1‑149 (MQ=255)

                                                        gAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgcctgcc                                                                                      >  8:271042/1‑149 (MQ=255)

                                                        gAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgcctgcc                                                                                      >  6:97054/1‑149 (MQ=255)

                                                        gAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACgcctgcc                                                                                      >  7:439976/1‑149 (MQ=255)

                                                             ggCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt                                                                                 >  4:278795‑M2/1‑92 (MQ=255)

                                                              gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTc                                                                                 >  2:286331/1‑148 (MQ=255)

                                                              gCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTc                                                                                 >  5:101927/1‑148 (MQ=255)

                                                               cggtCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCa                                                                               <  7:186054/146‑1 (MQ=255)

                                                                    aCGCAGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGACTGTTCCAGACGc                                                                          >  8:413466/1‑149 (MQ=255)

                                                                       ccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTg                                                                        >  6:54007/1‑148 (MQ=255)

                                                                       ccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGCGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAatat                                                                                                 <  1:350717/123‑1 (MQ=255)

                                                                       ccgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGAGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAatat                                                                                                 >  2:350717/1‑123 (MQ=255)

                                                                        cgcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCa                                                                      >  7:70438/1‑149 (MQ=255)

                                                                         gcATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCAt                                                                     >  7:329925/1‑149 (MQ=255)

                                                                           aTCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                   >  5:63644‑M2/1‑78 (MQ=255)

                                                                            tCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGa                                                                  >  1:92266/1‑149 (MQ=255)

                                                                               ggCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACa                                                                >  5:232695/1‑148 (MQ=255)

                                                                               atatctccggcagcgggcttgtcatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACaa                                                               >  2:179481‑M1/70‑149 (MQ=255)

                                                                                 ccACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACaaa                                                              <  4:92799/148‑1 (MQ=255)

                                                                                 ccACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACaaa                                                              >  3:92799/1‑148 (MQ=255)

                                                                                    cTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCa                                                          >  3:222988/1‑149 (MQ=255)

                                                                                     tttCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGa                                                                                                                   <  6:361298/91‑1 (MQ=255)

                                                                                     tttCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCAc                                                         <  8:70438/149‑1 (MQ=255)

                                                                                        cAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                       >  6:428281‑M2/1‑65 (MQ=255)

                                                                                        cAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                       >  1:143835‑M2/1‑65 (MQ=255)

                                                                                           ttttACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCttt                                                   <  4:222988/149‑1 (MQ=255)

                                                                                              tACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTgg                                                 <  1:63098/148‑1 (MQ=255)

                                                                                              ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTg                                                  <  1:35781‑M1/93‑1 (MQ=255)

                                                                                               aCTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                   <  2:136960‑M2/129‑72 (MQ=255)

                                                                                               aCTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                   >  1:136960‑M2/1‑58 (MQ=255)

                                                                                                  ctTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGgtg                                            <  8:329925/149‑1 (MQ=255)

                                                                                                   tttCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGgtgt                                           >  2:202096/1‑149 (MQ=255)

                                                                                                     tctcGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGgtgt                                           <  7:271042/147‑1 (MQ=255)

                                                                                                         ggttaagtgataacagatgtctggaaatataggggcaaatccaGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGc                                     >  2:35781‑M1/44‑149 (MQ=255)

                                                                                                         ggAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCaa                                       <  8:418841/147‑1 (MQ=255)

                                                                                                         ggAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGc                                     <  4:361980/149‑1 (MQ=255)

                                                                                                               aCTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctta                                >  2:358220‑M2/1‑42 (MQ=255)

                                                                                                                cTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg                              >  7:11057‑M2/1‑41 (MQ=255)

                                                                                                                cTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagg                              >  5:366012‑M2/1‑41 (MQ=255)

                                                                                                                cTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAAcg                              >  2:10765/1‑149 (MQ=255)

                                                                                                                 tataACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCCCCTCTTTGGCGGTGTTCAAGCCAAAAcgc                             >  7:419700/1‑149 (MQ=255)

                                                                                                                   taACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGACTTTAATATTGACGCATGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAAcgcg                            >  5:55331/1‑148 (MQ=255)

                                                                                                                      ccGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAAc                        <  5:97054/149‑1 (MQ=255)

                                                                                                                        gTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGgt                                             <  6:246211/126‑1 (MQ=255)

                                                                                                                        gTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGgt                                             >  5:246211/1‑126 (MQ=255)

                                                                                                                              gTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGc                <  7:413466/149‑1 (MQ=255)

                                                                                                                               ttATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCt               <  5:54007/149‑1 (MQ=255)

                                                                                                                               ttATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCt               >  1:233348/1‑149 (MQ=255)

                                                                                                                                tataGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTg              >  1:355763/1‑149 (MQ=255)

                                                                                                                                 ataGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAACACGCGCAACCAGCAGGCTg              >  6:124432/1‑148 (MQ=255)

                                                                                                                                 ataGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTg              <  5:124432/148‑1 (MQ=255)

                                                                                                                                  taGCCGTAACTGTCAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACTCATGCCTGTTCCAGACGCTGCATTGACAACCTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGGAGGCTGGt            <  2:59618/149‑1 (MQ=255)

                                                                                                                                  taGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGt            <  8:439976/149‑1 (MQ=255)

                                                                                                                                  taGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGt            <  2:195389/149‑1 (MQ=255)

                                                                                                                                  aatataggggcaaatccaGTGCTGACGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGt            >  8:76509‑M1/19‑149 (MQ=255)

                                                                                                                                     ccGTAACTGTAAGAGGTGCTGGCGCGTTTAATAACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTAAAGCCAAAACGCGCAACCAGCAGGCTGGTGc          >  4:36947/1‑148 (MQ=255)

                                                                                                                                       gTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGc                                                                       >  6:66883/1‑85 (MQ=255)

                                                                                                                                       gTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGc                                                                       <  5:66883/85‑1 (MQ=255)

                                                                                                                                          aCTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                   <  6:49494‑M2/86‑72 (MQ=255)

                                                                                                                                          aCTGTAAGCGGTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttta                                                                   >  5:49494‑M2/1‑15 (MQ=255)

                                                                                                                                          aCTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAg    <  5:402058/149‑1 (MQ=255)

                                                                                                                                              tAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGaa  <  2:92266/147‑1 (MQ=255)

TTACCTGAATGCTCTGAGGCTGATGACAAACGAAGAACTGTCTAATGCGTAGACCGGAAAAGGCGTTCACGCCGCATCCGGCCACTTTCAGTTTTACTCTTTCTCGGAGTAACTATAACCGTAATAGTTATAGCCGTAACTGTAAGCGGTGCTGGCGCGTTTAATCACACCATTGAGGATAGCGCCTTTAATATTGACGCCTGCCTGTTCCAGACGCTGCATTGACAAACTCACCTCTTTGGCGGTGTTCAAGCCAAAACGCGCAACCAGCAGGCTGGTGCCAACAGAA  >  NC_000913/1041937‑1042225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.