Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,625,592 Δ95,041 bp IS150‑mediated yhhJ[mokA] 82 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3625592 3720632 95041 94 [2] [0] 175 yhhJ–[mokA] yhhJ,rbbA,yhiI,yhiJ,yhiL,yhiL,yhiM,yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,insH1,yhiS,slp,dctR,yhiD,hdeB,hdeA,hdeD,arrS,gadE,mdtE,mdtF,gadW,gadY,gadX,gadA,yhjA,treF,yhjB,yhjC,yhjD,yhjE,yhjG,yhjH,kdgK,yhjJ,dctA,yhjK,bcsC,bcsZ,bcsB,bcsA,bcsQ,yhjR,bcsE,bcsF,bcsG,ldrD,rdlD,yhjV,dppF,dppD,dppC,dppB,dppA,proK,eptB,yhjX,yhjY,tag,yiaC,bisC,yiaD,ghrB,yiaF,yiaG,cspA,hokA,[mokA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 36255912 (0.020)90 (0.960) 71/282 0.2 97.8% noncoding (3/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 3720633 = NA (NA)noncoding (1/1443 nt) IS150 repeat region

CGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGC  >  NC_000913/3625443‑3625735
                                                                                                                                                    |                                                                                                                                                
cGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCGTTGCGGGGAGCGGGATTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAA                                                                                                                                                  <  6:59163‑M1/149‑1 (MQ=255)
cGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAA                                                                                                                                                  <  8:51825‑M1/149‑1 (MQ=255)
       tGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactg                                                                                                                                           <  7:136182‑M1/149‑8 (MQ=255)
         cGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgc                                                                                                                                          <  3:300455‑M1/148‑9 (MQ=255)
           aaaaGCAGCCATGGACAGAAACTATCTGGCGTGAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCATAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacc                                                                                                                                       <  2:138030‑M1/149‑12 (MQ=255)
           aaaaGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacc                                                                                                                                       >  1:11065‑M1/1‑138 (MQ=255)
                 agcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccatttt                                                                                                                                 >  6:373764‑M1/1‑132 (MQ=255)
                   ccATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgt                                                                                                                               >  8:21577‑M1/1‑130 (MQ=255)
                    cATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgtt                                                                                                                              <  8:145483‑M1/149‑21 (MQ=255)
                    cATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgtt                                                                                                                              <  7:128808‑M1/149‑21 (MQ=255)
                    cATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgtt                                                                                                                              <  7:118172‑M1/149‑21 (MQ=255)
                     aTGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttg                                                                                                                             <  3:351486‑M1/149‑22 (MQ=255)
                        gACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttgga                                                                                                                           <  8:186015‑M1/148‑24 (MQ=255)
                         aCAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggac                                                                                                                          >  7:87656‑M1/1‑124 (MQ=255)
                           aGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgat                                                                                                                       >  1:195629‑M1/1‑122 (MQ=255)
                           aGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgat                                                                                                                       >  8:189685‑M1/1‑122 (MQ=255)
                            gAAACTATCTGGCGTCAGTCCTTGCGGTGAGCTGGCTTGCGTAATCTTGACCTGAATACACTACTGAGTCTCAAAAACCCGGATAACTGAACCTGTCCAGGGTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatg                                                                                                                      <  5:167943‑M1/149‑29 (MQ=255)
                             aaaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGc                                                                                                                                              >  3:102538/1‑124 (MQ=255)
                             aaaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGc                                                                                                                                              <  4:102538/124‑1 (MQ=255)
                               aCTATCTGGCGTCAGTCCTTGCGGGGCGCGGGCTTTCGTAAGCTTCCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaa                                                                                                                   <  1:109259‑M1/149‑32 (MQ=255)
                                 tATCTGGCGTCAGTCCTTGCGGGGAGCGGGCGTTCGTAATCTTGCCCGGAATACAGGTCTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatg                                                                                                                 <  1:102978‑M1/149‑34 (MQ=255)
                                      ggCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggaagatgatatggaa                                                                                                              >  2:225042‑M1/1‑111 (MQ=255)
                                       gCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaata                                                                                                            <  2:195629‑M1/148‑39 (MQ=255)
                                          tCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagccc                                                                                                        >  1:397789‑M1/1‑107 (MQ=255)
                                              tCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaa                                                                                                    >  2:252549‑M1/1‑103 (MQ=255)
                                                cTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgctcccattttgttggacgatgaaatggaatagcccctaat                                                                                                   <  2:226234‑M1/148‑48 (MQ=255)
                                                cTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGGTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata                                                                                                  <  8:331176‑M1/149‑49 (MQ=255)
                                                   gCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat                                                                                                 <  1:252549‑M1/147‑50 (MQ=255)
                                                     ggggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca                                                                                             <  5:373764‑M1/149‑54 (MQ=255)
                                                       ggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttgga                                                                                                                           >  8:359019‑M1/1‑94 (MQ=255)
                                                       ggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttgga                                                                                                                           <  7:359019‑M1/117‑24 (MQ=255)
                                                        gAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag                                                                                          >  2:362830‑M1/1‑93 (MQ=255)
                                                           cGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc                                                                                        >  8:15044‑M1/1‑90 (MQ=255)
                                                              gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa                                                                                    <  7:189685‑M1/149‑63 (MQ=255)
                                                              gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa                                                                                    <  7:242277‑M1/149‑63 (MQ=255)
                                                               cTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat                                                                                   <  1:362830‑M1/149‑64 (MQ=255)
                                                                tttCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagccactaatatgtcaaagccaaaata                                                                                  >  5:83239‑M1/1‑85 (MQ=255)
                                                                   cGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                                                               >  8:203104‑M1/1‑82 (MQ=255)
                                                                    gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatgg                                                                                                                <  2:350065‑M1/115‑35 (MQ=255)
                                                                    gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatgg                                                                                                                >  1:350065‑M1/1‑81 (MQ=255)
                                                                      aaTCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt                                                                            >  5:221308‑M1/1‑79 (MQ=255)
                                                                      aaTCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacacttt                                                                            >  7:368031‑M1/1‑79 (MQ=255)
                                                                          ttGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga                                                                         >  7:201776‑M1/1‑75 (MQ=255)
                                                                            gCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa                                                                       <  6:138365‑M1/148‑76 (MQ=255)
                                                                            gCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa                                                                        <  1:121871‑M1/147‑75 (MQ=255)
                                                                             cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag                                                                     <  6:196568‑M1/149‑78 (MQ=255)
                                                                             cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa                                                                      <  1:107122‑M1/148‑77 (MQ=255)
                                                                             cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa                                                                      <  7:114419‑M1/148‑77 (MQ=255)
                                                                             cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                                                                           <  7:31489‑M1/143‑72 (MQ=255)
                                                                             cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                                                                           >  8:31489‑M1/1‑72 (MQ=255)
                                                                              ccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc                                                                    >  3:190168‑M1/1‑71 (MQ=255)
                                                                                  aaTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc                                                                 <  4:190168‑M1/148‑82 (MQ=255)
                                                                                  aaTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgatggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgc                                                                  <  1:225042‑M1/147‑81 (MQ=255)
                                                                                         gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttg                                                              <  5:137285‑M1/144‑85 (MQ=255)
                                                                                         gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttg                                                              >  6:137285‑M1/1‑60 (MQ=255)
                                                                                         gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc                                                                                              <  4:226315‑M1/112‑53 (MQ=255)
                                                                                         gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagccactaatatgtc                                                                                              >  3:226315‑M1/1‑60 (MQ=255)
                                                                                           cTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt                                                       <  6:221308‑M1/149‑92 (MQ=255)
                                                                                              aGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTAATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa                                                    >  6:381996‑M1/1‑55 (MQ=255)
                                                                                              aGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGGCAGTTCATAAtgtactgcacccattttgttggacgatgaaatgtaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccgtgaagtcgtga                                                     <  5:356472‑M1/148‑94 (MQ=255)
                                                                                                tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat                                                   >  5:136434‑M1/1‑53 (MQ=255)
                                                                                                tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                                                                           >  2:393387‑M1/1‑53 (MQ=255)
                                                                                                tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                                                                           <  1:393387‑M1/124‑72 (MQ=255)
                                                                                                  tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac                                                >  1:254347‑M1/1‑51 (MQ=255)
                                                                                                  tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatca                                                 <  6:366556‑M1/148‑98 (MQ=255)
                                                                                                   cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac                                                >  6:146984‑M1/1‑50 (MQ=255)
                                                                                                   cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGAGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt                                                          >  3:28464‑M1/1‑50 (MQ=255)
                                                                                                   cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGAGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt                                                          <  4:28464‑M1/138‑89 (MQ=255)
                                                                                                       aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactactt                                           <  5:146984‑M1/149‑104 (MQ=255)
                                                                                                           cGGTTAACTGAAACTGTCCAGGTTTTGGTGGTCAGTTCATAAtgtacttcacccattttgtttgacgatgaaatggaatagcccctaatatgtcaaagcctaaattcccttttgaaaagcgccttgaagtagtgattcacgacttcaag                                       <  5:57474‑M1/149‑108 (MQ=255)
                                                                                                             gTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac                                     >  5:224598‑M1/1‑40 (MQ=255)
                                                                                                             gTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaacacccttttgaaaagcgccttgaagtcgtgaatcac                                                <  3:60080‑M1/138‑99 (MQ=255)
                                                                                                             gTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaacacccttttgaaaagcgccttgaagtcgtgaatcac                                                >  4:60080‑M1/1‑40 (MQ=255)
                                                                                                                 aCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgat                                 <  1:137216‑M1/149‑114 (MQ=255)
                                                                                                                  cTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgat                                 >  4:279056‑M1/1‑35 (MQ=255)
                                                                                                                    gAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgtt                              >  5:288053‑M1/1‑33 (MQ=255)
                                                                                                                     aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga                               <  7:120120‑M1/147‑116 (MQ=255)
                                                                                                                     aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga                               <  7:21577‑M1/147‑116 (MQ=255)
                                                                                                                        cTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtt                          <  8:87656‑M1/149‑121 (MQ=255)
                                                                                                                             cAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacag                      >  5:376530‑M1/1‑24 (MQ=255)
                                                                                                                             cAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtt                          >  2:231222‑M1/1‑24 (MQ=255)
                                                                                                                             cAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtt                          <  1:231222‑M1/144‑121 (MQ=255)
                                                                                                                             cAGGTTTTGGGGGGCAGTTCATAAtgtactgcacccattttgttggacgatgaactggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacag                      <  2:397789‑M1/148‑125 (MQ=255)
                                                                                                                              aGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacagga                    >  3:25441‑M1/1‑23 (MQ=255)
                                                                                                                              aGGTTTTGGGGGTCAGTTCATAAtctactgcacccattttgtaggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccattttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatgtttacagga                    >  2:267252‑M1/1‑23 (MQ=255)
                                                                                                                                gTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatc                  <  7:203104‑M1/149‑129 (MQ=255)
                                                                                                                                      ggggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcg            >  2:49311‑M1/1‑15 (MQ=255)
                                                                                                                                      ggggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcg            >  2:110547‑M1/1‑15 (MQ=255)
                                                                                                                                      ggggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctc             <  3:73695‑M1/148‑134 (MQ=255)
                                                                                                                                       gggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcgg           <  3:279056‑M1/149‑136 (MQ=255)
                                                                                                                                             gTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgtt     >  7:382782‑M1/1‑8 (MQ=255)
                                                                                                                                              ttCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttt    >  2:267422‑M1/1‑7 (MQ=255)
                                                                                                                                                 aTAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttg  <  5:381996‑M1/148‑145 (MQ=255)
                                                                                                                                                 aTAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttg  <  6:136434‑M1/148‑145 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
CGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGC  >  NC_000913/3625443‑3625735

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.