| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,625,592 | Δ95,041 bp | IS150‑mediated | yhhJ–[mokA] | 82 genes yhhJ, rbbA, yhiI, yhiJ, yhiL, yhiL, yhiM, yhiN, pitA, uspB, uspA, dtpB, rsmJ, prlC, rlmJ, gor, dinQ, agrA, agrB, arsR, arsB, arsC, yhiS, insH1, yhiS, slp, dctR, yhiD, hdeB, hdeA, hdeD, arrS, gadE, mdtE, mdtF, gadW, gadY, gadX, gadA, yhjA, treF, yhjB, yhjC, yhjD, yhjE, yhjG, yhjH, kdgK, yhjJ, dctA, yhjK, bcsC, bcsZ, bcsB, bcsA, bcsQ, yhjR, bcsE, bcsF, bcsG, ldrD, rdlD, yhjV, dppF, dppD, dppC, dppB, dppA, proK, eptB, yhjX, yhjY, tag, yiaC, bisC, yiaD, ghrB, yiaF, yiaG, cspA, hokA, [mokA] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3625592 | 3720632 | 95041 | 94 [2] | [0] 175 | yhhJ–[mokA] | yhhJ,rbbA,yhiI,yhiJ,yhiL,yhiL,yhiM,yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,insH1,yhiS,slp,dctR,yhiD,hdeB,hdeA,hdeD,arrS,gadE,mdtE,mdtF,gadW,gadY,gadX,gadA,yhjA,treF,yhjB,yhjC,yhjD,yhjE,yhjG,yhjH,kdgK,yhjJ,dctA,yhjK,bcsC,bcsZ,bcsB,bcsA,bcsQ,yhjR,bcsE,bcsF,bcsG,ldrD,rdlD,yhjV,dppF,dppD,dppC,dppB,dppA,proK,eptB,yhjX,yhjY,tag,yiaC,bisC,yiaD,ghrB,yiaF,yiaG,cspA,hokA,[mokA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3625591 | 2 (0.020) | 90 (0.960) | 71/282 | 0.2 | 97.8% | noncoding (3/82 nt) | RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 3720633 = | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
CGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGC > NC_000913/3625443‑3625735 | cGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCGTTGCGGGGAGCGGGATTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAA < 6:59163‑M1/149‑1 (MQ=255)cGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAA < 8:51825‑M1/149‑1 (MQ=255) tGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactg < 7:136182‑M1/149‑8 (MQ=255) cGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgc < 3:300455‑M1/148‑9 (MQ=255) aaaaGCAGCCATGGACAGAAACTATCTGGCGTGAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCATAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacc < 2:138030‑M1/149‑12 (MQ=255) aaaaGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacc > 1:11065‑M1/1‑138 (MQ=255) agcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccatttt > 6:373764‑M1/1‑132 (MQ=255) ccATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgt > 8:21577‑M1/1‑130 (MQ=255) cATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgtt < 8:145483‑M1/149‑21 (MQ=255) cATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgtt < 7:128808‑M1/149‑21 (MQ=255) cATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgtt < 7:118172‑M1/149‑21 (MQ=255) aTGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttg < 3:351486‑M1/149‑22 (MQ=255) gACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttgga < 8:186015‑M1/148‑24 (MQ=255) aCAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggac > 7:87656‑M1/1‑124 (MQ=255) aGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgat > 1:195629‑M1/1‑122 (MQ=255) aGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgat > 8:189685‑M1/1‑122 (MQ=255) gAAACTATCTGGCGTCAGTCCTTGCGGTGAGCTGGCTTGCGTAATCTTGACCTGAATACACTACTGAGTCTCAAAAACCCGGATAACTGAACCTGTCCAGGGTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatg < 5:167943‑M1/149‑29 (MQ=255) aaaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGc > 3:102538/1‑124 (MQ=255) aaaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGc < 4:102538/124‑1 (MQ=255) aCTATCTGGCGTCAGTCCTTGCGGGGCGCGGGCTTTCGTAAGCTTCCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaa < 1:109259‑M1/149‑32 (MQ=255) tATCTGGCGTCAGTCCTTGCGGGGAGCGGGCGTTCGTAATCTTGCCCGGAATACAGGTCTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatg < 1:102978‑M1/149‑34 (MQ=255) ggCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggaagatgatatggaa > 2:225042‑M1/1‑111 (MQ=255) gCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaata < 2:195629‑M1/148‑39 (MQ=255) tCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagccc > 1:397789‑M1/1‑107 (MQ=255) tCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 2:252549‑M1/1‑103 (MQ=255) cTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgctcccattttgttggacgatgaaatggaatagcccctaat < 2:226234‑M1/148‑48 (MQ=255) cTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGGTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaata < 8:331176‑M1/149‑49 (MQ=255) gCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatat < 1:252549‑M1/147‑50 (MQ=255) ggggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca < 5:373764‑M1/149‑54 (MQ=255) ggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttgga > 8:359019‑M1/1‑94 (MQ=255) ggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttgga < 7:359019‑M1/117‑24 (MQ=255) gAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaag > 2:362830‑M1/1‑93 (MQ=255) cGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagcc > 8:15044‑M1/1‑90 (MQ=255) gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa < 7:189685‑M1/149‑63 (MQ=255) gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa < 7:242277‑M1/149‑63 (MQ=255) cTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaat < 1:362830‑M1/149‑64 (MQ=255) tttCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagccactaatatgtcaaagccaaaata > 5:83239‑M1/1‑85 (MQ=255) cGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc > 8:203104‑M1/1‑82 (MQ=255) gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatgg < 2:350065‑M1/115‑35 (MQ=255) gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatgg > 1:350065‑M1/1‑81 (MQ=255) aaTCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttt > 5:221308‑M1/1‑79 (MQ=255) aaTCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacacttt > 7:368031‑M1/1‑79 (MQ=255) ttGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttga > 7:201776‑M1/1‑75 (MQ=255) gCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaa < 6:138365‑M1/148‑76 (MQ=255) gCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaa < 1:121871‑M1/147‑75 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag < 6:196568‑M1/149‑78 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa < 1:107122‑M1/148‑77 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa < 7:114419‑M1/148‑77 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt < 7:31489‑M1/143‑72 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt > 8:31489‑M1/1‑72 (MQ=255) ccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc > 3:190168‑M1/1‑71 (MQ=255) aaTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcc < 4:190168‑M1/148‑82 (MQ=255) aaTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgatggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgc < 1:225042‑M1/147‑81 (MQ=255) gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttg < 5:137285‑M1/144‑85 (MQ=255) gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttg > 6:137285‑M1/1‑60 (MQ=255) gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc < 4:226315‑M1/112‑53 (MQ=255) gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagccactaatatgtc > 3:226315‑M1/1‑60 (MQ=255) cTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt < 6:221308‑M1/149‑92 (MQ=255) aGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTAATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa > 6:381996‑M1/1‑55 (MQ=255) aGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGGCAGTTCATAAtgtactgcacccattttgttggacgatgaaatgtaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccgtgaagtcgtga < 5:356472‑M1/148‑94 (MQ=255) tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat > 5:136434‑M1/1‑53 (MQ=255) tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt > 2:393387‑M1/1‑53 (MQ=255) tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt < 1:393387‑M1/124‑72 (MQ=255) tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac > 1:254347‑M1/1‑51 (MQ=255) tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatca < 6:366556‑M1/148‑98 (MQ=255) cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac > 6:146984‑M1/1‑50 (MQ=255) cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGAGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt > 3:28464‑M1/1‑50 (MQ=255) cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGAGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagt < 4:28464‑M1/138‑89 (MQ=255) aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactactt < 5:146984‑M1/149‑104 (MQ=255) cGGTTAACTGAAACTGTCCAGGTTTTGGTGGTCAGTTCATAAtgtacttcacccattttgtttgacgatgaaatggaatagcccctaatatgtcaaagcctaaattcccttttgaaaagcgccttgaagtagtgattcacgacttcaag < 5:57474‑M1/149‑108 (MQ=255) gTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaac > 5:224598‑M1/1‑40 (MQ=255) gTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaacacccttttgaaaagcgccttgaagtcgtgaatcac < 3:60080‑M1/138‑99 (MQ=255) gTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaacacccttttgaaaagcgccttgaagtcgtgaatcac > 4:60080‑M1/1‑40 (MQ=255) aCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgat < 1:137216‑M1/149‑114 (MQ=255) cTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgat > 4:279056‑M1/1‑35 (MQ=255) gAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgtt > 5:288053‑M1/1‑33 (MQ=255) aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga < 7:120120‑M1/147‑116 (MQ=255) aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga < 7:21577‑M1/147‑116 (MQ=255) cTGTCCAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtt < 8:87656‑M1/149‑121 (MQ=255) cAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacag > 5:376530‑M1/1‑24 (MQ=255) cAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtt > 2:231222‑M1/1‑24 (MQ=255) cAGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtt < 1:231222‑M1/144‑121 (MQ=255) cAGGTTTTGGGGGGCAGTTCATAAtgtactgcacccattttgttggacgatgaactggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacag < 2:397789‑M1/148‑125 (MQ=255) aGGTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacagga > 3:25441‑M1/1‑23 (MQ=255) aGGTTTTGGGGGTCAGTTCATAAtctactgcacccattttgtaggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccattttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatgtttacagga > 2:267252‑M1/1‑23 (MQ=255) gTTTTGGGGGTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatc < 7:203104‑M1/149‑129 (MQ=255) ggggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcg > 2:49311‑M1/1‑15 (MQ=255) ggggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcg > 2:110547‑M1/1‑15 (MQ=255) ggggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctc < 3:73695‑M1/148‑134 (MQ=255) gggTCAGTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcgg < 3:279056‑M1/149‑136 (MQ=255) gTTCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgtt > 7:382782‑M1/1‑8 (MQ=255) ttCATAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttt > 2:267422‑M1/1‑7 (MQ=255) aTAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttg < 5:381996‑M1/148‑145 (MQ=255) aTAAtgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgttttg < 6:136434‑M1/148‑145 (MQ=255) | CGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGC > NC_000913/3625443‑3625735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |