Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,625,589 Δ95,041 bp yhhJ[mokA] 82 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3625589 3720629 95041 91 [0] [0] 91 yhhJ–[mokA] yhhJ,rbbA,yhiI,yhiJ,yhiL,yhiL,yhiM,yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,insH1,yhiS,slp,dctR,yhiD,hdeB,hdeA,hdeD,arrS,gadE,mdtE,mdtF,gadW,gadY,gadX,gadA,yhjA,treF,yhjB,yhjC,yhjD,yhjE,yhjG,yhjH,kdgK,yhjJ,dctA,yhjK,bcsC,bcsZ,bcsB,bcsA,bcsQ,yhjR,bcsE,bcsF,bcsG,ldrD,rdlD,yhjV,dppF,dppD,dppC,dppB,dppA,proK,eptB,yhjX,yhjY,tag,yiaC,bisC,yiaD,ghrB,yiaF,yiaG,cspA,hokA,[mokA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 36255880 (0.000)91 (1.070) 76/282 0.1 100% intergenic (+74/+91) yhhI/yhhJ putative transposase/putative ABC transporter permease
?NC_000913 3720630 = NA (NA)pseudogene (3/185 nt) mokA pseudogene, overlapping regulatory peptide, enables hokB; completely contained in another CDS

GACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATG  >  NC_000913/3625441‑3625734
                                                                                                                                                   |                                                                                                                                                  
gACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAg                                                                                                                                                   <  3:93034‑M1/149‑2 (MQ=255)
gACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAg                                                                                                                                                   >  6:178467‑M1/1‑148 (MQ=255)
 aCGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgt                                                                                                                                                  <  4:20432‑M1/149‑3 (MQ=255)
 aCGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgt                                                                                                                                                  <  8:58223‑M1/149‑3 (MQ=255)
  cGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCATAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGTGGGTCAGTTCAgt                                                                                                                                                  <  8:106683‑M1/148‑3 (MQ=255)
     aaGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatg                                                                                                                                               >  2:361123‑M1/1‑143 (MQ=255)
     aaGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatg                                                                                                                                               >  2:15863‑M1/1‑143 (MQ=255)
     aaGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatg                                                                                                                                               >  6:193065‑M1/1‑143 (MQ=255)
        aTGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtact                                                                                                                                           <  1:173726‑M1/149‑10 (MQ=255)
          gCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGCAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactg                                                                                                                                          >  6:246315‑M1/1‑138 (MQ=255)
            gAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTGCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGGTTTGGGGGGCAGTTCAgtatgtactgcac                                                                                                                                       <  1:130751‑M1/149‑14 (MQ=255)
                   atcaatggaCAGAAACTATCTGGCTTCAGTCCTTGCGGGTAGAGGGATTTAGTAATCTTTCACTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGTTTTTGGGGGTAAGTTCAgtatgtactgaacccattt                                                                                                                                 <  6:351945‑M1/144‑20 (MQ=255)
                   agcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccatttt                                                                                                                                <  6:86332‑M1/149‑21 (MQ=255)
                    gcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttg                                                                                                                               <  2:222009‑M1/149‑22 (MQ=255)
                    gcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGCGGAGCGGGCTTTCGTAATCTTGCCCAGAATACAGGACTGACTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGACAGTGCAgtatgtactgcacccattttg                                                                                                                               >  1:250958‑M1/1‑128 (MQ=255)
                       aTGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttg                                                                                                                            <  8:86899‑M1/149‑25 (MQ=255)
                           aCAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggac                                                                                                                         >  7:212468‑M1/1‑121 (MQ=255)
                            cAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacga                                                                                                                       <  1:361123‑M1/149‑30 (MQ=255)
                            cAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacga                                                                                                                       <  5:193065‑M1/149‑30 (MQ=255)
                               aaaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatg                                                                                                                     >  4:331737‑M1/1‑117 (MQ=255)
                                aaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgtt                                                                                                                             <  1:54799‑M1/139‑24 (MQ=255)
                                aaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgtt                                                                                                                             >  2:54799‑M1/1‑116 (MQ=255)
                                 aCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaa                                                                                                                  <  7:188957‑M1/149‑35 (MQ=255)
                                     tCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgaacccattttgttggacgatgaaatgg                                                                                                               >  4:257599‑M1/1‑111 (MQ=255)
                                         gCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaa                                                                                                             <  4:203703‑M1/146‑40 (MQ=255)
                                         gCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatgga                                                                                                              <  3:257599‑M1/145‑39 (MQ=255)
                                             cAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccc                                                                                                      <  8:212468‑M1/149‑47 (MQ=255)
                                               gTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACGGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccct                                                                                                     >  1:103709‑M1/1‑101 (MQ=255)
                                                tCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaa                                                                                                   >  5:153010‑M1/1‑100 (MQ=255)
                                                      cGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt                                                                                              >  4:79958‑M1/1‑94 (MQ=255)
                                                       ggggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc                                                                                             >  4:80409‑M1/1‑93 (MQ=255)
                                                        gggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca                                                                                            >  5:37928‑M1/1‑92 (MQ=255)
                                                            gCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccc                                                                                                      >  3:180679‑M1/1‑88 (MQ=255)
                                                            gCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccc                                                                                                      <  4:180679‑M1/134‑47 (MQ=255)
                                                                gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa                                                                                   >  6:100823‑M1/1‑84 (MQ=255)
                                                                  tttCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaata                                                                                 >  4:321836‑M1/1‑82 (MQ=255)
                                                                     cGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacc                                                                               <  3:297457‑M1/148‑70 (MQ=255)
                                                                      gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct                                                                             >  2:178745‑M1/1‑78 (MQ=255)
                                                                      gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                                                              <  8:62374‑M1/148‑71 (MQ=255)
                                                                      gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc                                                                              <  5:100823‑M1/148‑71 (MQ=255)
                                                                       tAATCTTGCCCTTAATACAGGTCTGAGTATCAAAAAGCCGGTTAACTGAAAATTTCCAGGTTTTGGGTTTCAGTTCAttatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt                                                                            <  1:15863‑M1/149‑73 (MQ=255)
                                                                       tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt                                                                            <  3:79958‑M1/149‑73 (MQ=255)
                                                                       tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt                                                                            <  5:61332‑M1/149‑73 (MQ=255)
                                                                       tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCACTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt                                                                            >  1:158997‑M1/1‑77 (MQ=255)
                                                                           cTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg                                                                         >  1:139269‑M1/1‑73 (MQ=255)
                                                                               cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag                                                                    <  3:321836‑M1/149‑81 (MQ=255)
                                                                               cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa                                                                     <  1:29520‑M1/148‑80 (MQ=255)
                                                                                ccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc                                                                   >  4:209664‑M1/1‑68 (MQ=255)
                                                                                 cTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcg                                                                  >  7:115403‑M1/1‑67 (MQ=255)
                                                                                    aaTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct                                                               >  7:45108‑M1/1‑64 (MQ=255)
                                                                                     aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt                                                              >  3:114572‑M1/1‑63 (MQ=255)
                                                                                     aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt                                                              <  5:178467‑M1/149‑87 (MQ=255)
                                                                                         aGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatg                                                                                                                >  2:283556‑M1/1‑59 (MQ=255)
                                                                                           gcctgAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc                                                        <  8:346691‑M1/147‑93 (MQ=255)
                                                                                           gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc                                                        <  3:209664‑M1/149‑93 (MQ=255)
                                                                                           gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc                                                        >  5:314459‑M1/1‑57 (MQ=255)
                                                                                             cTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt                                                      <  3:28188‑M1/149‑95 (MQ=255)
                                                                                             cTGAGTATCAAAAAGCAGGTTAACTGAAACTGTCCATGTTTTGGGTGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt                                                      <  1:259244‑M1/149‑95 (MQ=255)
                                                                                              tGATTATCAAAAAGCCGTTTAAATGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtacttcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa                                                                     <  7:20017‑M1/133‑80 (MQ=255)
                                                                                              tGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatcgaatagccactaatatgtcaaagccaaaataccctattcaaaa                                                                     >  8:20017‑M1/1‑54 (MQ=255)
                                                                                                 gTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat                                                  <  6:37928‑M1/149‑99 (MQ=255)
                                                                                                  tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTGGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatttcaaagccaaaataaccttttgaactgcgccttgaattagtgaat                                                  >  6:19455‑M1/1‑50 (MQ=255)
                                                                                                   aTCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                                                                  <  7:97060‑M1/99‑51 (MQ=255)
                                                                                                   aTCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaat                                                                                                  >  8:97060‑M1/1‑49 (MQ=255)
                                                                                                    tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac                                               >  4:31400‑M1/1‑48 (MQ=255)
                                                                                                      aaatatccggttaaCTGAAACTGTCCAGGTTTTGGGGGTCAGGTCAgtatgtaatgcacccattttgtttgacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaatgcgccttgaagtcgtgaatcac                                               <  2:278459‑M1/141‑102 (MQ=255)
                                                                                                      aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatatcccctaatatgtcaaatccaaaatacacttttgaaaagagccttgaagtcttgaatcac                                               >  1:278459‑M1/1‑46 (MQ=255)
                                                                                                      aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                                                                          <  4:115160‑M1/120‑75 (MQ=255)
                                                                                                      aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt                                                                          >  3:115160‑M1/1‑46 (MQ=255)
                                                                                                         aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc                                                        <  8:94115‑M1/135‑93 (MQ=255)
                                                                                                         aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc                                                        >  7:94115‑M1/1‑43 (MQ=255)
                                                                                                          aGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttc                                         <  2:139269‑M1/149‑108 (MQ=255)
                                                                                                            ccGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcac                                       <  5:103853‑M1/149‑110 (MQ=255)
                                                                                                                ttAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaact                                   <  1:320663‑M1/149‑114 (MQ=255)
                                                                                                                  aaCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactg                                  <  3:13315‑M1/148‑115 (MQ=255)
                                                                                                                   aCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactga                                 <  8:115403‑M1/148‑116 (MQ=255)
                                                                                                                    cTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaatcgccttgaagtcgtcaatcactacttcacaactcat                                >  8:247813‑M1/1‑32 (MQ=255)
                                                                                                                       aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatg                            <  3:31400‑M1/149‑121 (MQ=255)
                                                                                                                       aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga                              <  7:196301‑M1/147‑119 (MQ=255)
                                                                                                                       aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga                              >  8:196301‑M1/1‑29 (MQ=255)
                                                                                                                       aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga                              <  2:103709‑M1/147‑119 (MQ=255)
                                                                                                                        aaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccataatatgtcaaagccaaaaaacccttttgaaaagcgccttgaagtcttgaatcactacttcacaactgatgaagg                           >  2:155298‑M1/1‑28 (MQ=255)
                                                                                                                             tCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtta                        >  5:15651‑M1/1‑23 (MQ=255)
                                                                                                                               cAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactac                                            <  6:166964‑M1/125‑105 (MQ=255)
                                                                                                                                aGGTTTTGGGTGTCAGTTCAgtatgtactgcacccattttgtttgacgatgaattggaatagcccctattatgtgaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatctctacttcacaactgatgatggttacagga                   <  8:306421‑M1/149‑130 (MQ=255)
                                                                                                                                         gtgtcAGTTCAgtatgtacgtcacccatttttttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaaggcgttaatcactacttcacacctgatgatgggtacaggatcatctcg           <  3:309527‑M1/146‑138 (MQ=255)
                                                                                                                                         gggTCAGGTCAgtatgtactgcacccattttgttggacgatgaactggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcgg          <  3:187315‑M1/149‑139 (MQ=255)
                                                                                                                                               gttcagtatgtaatgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttagaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctctgcacgtt    <  1:75336‑M1/149‑145 (MQ=255)
                                                                                                                                                ttcagtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa                                                   <  8:274300‑M1/101‑98 (MQ=255)
                                                                                                                                                ttcagtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa                                                   >  7:274300‑M1/1‑4 (MQ=255)
                                                                                                                                                  cagtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgtttt  <  5:246315‑M1/148‑147 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATG  >  NC_000913/3625441‑3625734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.