| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,625,589 | Δ95,041 bp | yhhJ–[mokA] | 82 genes yhhJ, rbbA, yhiI, yhiJ, yhiL, yhiL, yhiM, yhiN, pitA, uspB, uspA, dtpB, rsmJ, prlC, rlmJ, gor, dinQ, agrA, agrB, arsR, arsB, arsC, yhiS, insH1, yhiS, slp, dctR, yhiD, hdeB, hdeA, hdeD, arrS, gadE, mdtE, mdtF, gadW, gadY, gadX, gadA, yhjA, treF, yhjB, yhjC, yhjD, yhjE, yhjG, yhjH, kdgK, yhjJ, dctA, yhjK, bcsC, bcsZ, bcsB, bcsA, bcsQ, yhjR, bcsE, bcsF, bcsG, ldrD, rdlD, yhjV, dppF, dppD, dppC, dppB, dppA, proK, eptB, yhjX, yhjY, tag, yiaC, bisC, yiaD, ghrB, yiaF, yiaG, cspA, hokA, [mokA] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3625589 | 3720629 | 95041 | 91 [0] | [0] 91 | yhhJ–[mokA] | yhhJ,rbbA,yhiI,yhiJ,yhiL,yhiL,yhiM,yhiN,pitA,uspB,uspA,dtpB,rsmJ,prlC,rlmJ,gor,dinQ,agrA,agrB,arsR,arsB,arsC,yhiS,insH1,yhiS,slp,dctR,yhiD,hdeB,hdeA,hdeD,arrS,gadE,mdtE,mdtF,gadW,gadY,gadX,gadA,yhjA,treF,yhjB,yhjC,yhjD,yhjE,yhjG,yhjH,kdgK,yhjJ,dctA,yhjK,bcsC,bcsZ,bcsB,bcsA,bcsQ,yhjR,bcsE,bcsF,bcsG,ldrD,rdlD,yhjV,dppF,dppD,dppC,dppB,dppA,proK,eptB,yhjX,yhjY,tag,yiaC,bisC,yiaD,ghrB,yiaF,yiaG,cspA,hokA,[mokA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3625588 | 0 (0.000) | 91 (1.070) | 76/282 | 0.1 | 100% | intergenic (+74/+91) | yhhI/yhhJ | putative transposase/putative ABC transporter permease |
| ? | NC_000913 | 3720630 = | NA (NA) | pseudogene (3/185 nt) | mokA | pseudogene, overlapping regulatory peptide, enables hokB; completely contained in another CDS | |||||
GACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATG > NC_000913/3625441‑3625734 | gACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAg < 3:93034‑M1/149‑2 (MQ=255)gACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAg > 6:178467‑M1/1‑148 (MQ=255) aCGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgt < 4:20432‑M1/149‑3 (MQ=255) aCGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgt < 8:58223‑M1/149‑3 (MQ=255) cGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCATAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGTGGGTCAGTTCAgt < 8:106683‑M1/148‑3 (MQ=255) aaGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatg > 2:361123‑M1/1‑143 (MQ=255) aaGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatg > 2:15863‑M1/1‑143 (MQ=255) aaGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatg > 6:193065‑M1/1‑143 (MQ=255) aTGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtact < 1:173726‑M1/149‑10 (MQ=255) gCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGCAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactg > 6:246315‑M1/1‑138 (MQ=255) gAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTGCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGGTTTGGGGGGCAGTTCAgtatgtactgcac < 1:130751‑M1/149‑14 (MQ=255) atcaatggaCAGAAACTATCTGGCTTCAGTCCTTGCGGGTAGAGGGATTTAGTAATCTTTCACTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGTTTTTGGGGGTAAGTTCAgtatgtactgaacccattt < 6:351945‑M1/144‑20 (MQ=255) agcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccatttt < 6:86332‑M1/149‑21 (MQ=255) gcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttg < 2:222009‑M1/149‑22 (MQ=255) gcCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGCGGAGCGGGCTTTCGTAATCTTGCCCAGAATACAGGACTGACTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGACAGTGCAgtatgtactgcacccattttg > 1:250958‑M1/1‑128 (MQ=255) aTGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttg < 8:86899‑M1/149‑25 (MQ=255) aCAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggac > 7:212468‑M1/1‑121 (MQ=255) cAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacga < 1:361123‑M1/149‑30 (MQ=255) cAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacga < 5:193065‑M1/149‑30 (MQ=255) aaaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatg > 4:331737‑M1/1‑117 (MQ=255) aaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgtt < 1:54799‑M1/139‑24 (MQ=255) aaCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgtt > 2:54799‑M1/1‑116 (MQ=255) aCTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaa < 7:188957‑M1/149‑35 (MQ=255) tCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgaacccattttgttggacgatgaaatgg > 4:257599‑M1/1‑111 (MQ=255) gCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaa < 4:203703‑M1/146‑40 (MQ=255) gCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatgga < 3:257599‑M1/145‑39 (MQ=255) cAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccc < 8:212468‑M1/149‑47 (MQ=255) gTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACGGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccct > 1:103709‑M1/1‑101 (MQ=255) tCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaa > 5:153010‑M1/1‑100 (MQ=255) cGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgt > 4:79958‑M1/1‑94 (MQ=255) ggggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtc > 4:80409‑M1/1‑93 (MQ=255) gggAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtca > 5:37928‑M1/1‑92 (MQ=255) gCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccc > 3:180679‑M1/1‑88 (MQ=255) gCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccc < 4:180679‑M1/134‑47 (MQ=255) gCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaa > 6:100823‑M1/1‑84 (MQ=255) tttCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaata > 4:321836‑M1/1‑82 (MQ=255) cGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacc < 3:297457‑M1/148‑70 (MQ=255) gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccct > 2:178745‑M1/1‑78 (MQ=255) gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc < 8:62374‑M1/148‑71 (MQ=255) gTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccc < 5:100823‑M1/148‑71 (MQ=255) tAATCTTGCCCTTAATACAGGTCTGAGTATCAAAAAGCCGGTTAACTGAAAATTTCCAGGTTTTGGGTTTCAGTTCAttatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 1:15863‑M1/149‑73 (MQ=255) tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 3:79958‑M1/149‑73 (MQ=255) tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt < 5:61332‑M1/149‑73 (MQ=255) tAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCACTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctt > 1:158997‑M1/1‑77 (MQ=255) cTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttg > 1:139269‑M1/1‑73 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaag < 3:321836‑M1/149‑81 (MQ=255) cccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa < 1:29520‑M1/148‑80 (MQ=255) ccTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagc > 4:209664‑M1/1‑68 (MQ=255) cTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcg > 7:115403‑M1/1‑67 (MQ=255) aaTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcct > 7:45108‑M1/1‑64 (MQ=255) aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt > 3:114572‑M1/1‑63 (MQ=255) aTACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgcctt < 5:178467‑M1/149‑87 (MQ=255) aGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatg > 2:283556‑M1/1‑59 (MQ=255) gcctgAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 8:346691‑M1/147‑93 (MQ=255) gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 3:209664‑M1/149‑93 (MQ=255) gACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc > 5:314459‑M1/1‑57 (MQ=255) cTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt < 3:28188‑M1/149‑95 (MQ=255) cTGAGTATCAAAAAGCAGGTTAACTGAAACTGTCCATGTTTTGGGTGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgt < 1:259244‑M1/149‑95 (MQ=255) tGATTATCAAAAAGCCGTTTAAATGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtacttcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaa < 7:20017‑M1/133‑80 (MQ=255) tGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatcgaatagccactaatatgtcaaagccaaaataccctattcaaaa > 8:20017‑M1/1‑54 (MQ=255) gTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaat < 6:37928‑M1/149‑99 (MQ=255) tATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTGGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatttcaaagccaaaataaccttttgaactgcgccttgaattagtgaat > 6:19455‑M1/1‑50 (MQ=255) aTCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaat < 7:97060‑M1/99‑51 (MQ=255) aTCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaat > 8:97060‑M1/1‑49 (MQ=255) tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcac > 4:31400‑M1/1‑48 (MQ=255) aaatatccggttaaCTGAAACTGTCCAGGTTTTGGGGGTCAGGTCAgtatgtaatgcacccattttgtttgacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaatgcgccttgaagtcgtgaatcac < 2:278459‑M1/141‑102 (MQ=255) aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatatcccctaatatgtcaaatccaaaatacacttttgaaaagagccttgaagtcttgaatcac > 1:278459‑M1/1‑46 (MQ=255) aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt < 4:115160‑M1/120‑75 (MQ=255) aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttt > 3:115160‑M1/1‑46 (MQ=255) aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc < 8:94115‑M1/135‑93 (MQ=255) aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtc > 7:94115‑M1/1‑43 (MQ=255) aGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttc < 2:139269‑M1/149‑108 (MQ=255) ccGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcac < 5:103853‑M1/149‑110 (MQ=255) ttAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaact < 1:320663‑M1/149‑114 (MQ=255) aaCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactg < 3:13315‑M1/148‑115 (MQ=255) aCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactga < 8:115403‑M1/148‑116 (MQ=255) cTGAAACTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaatcgccttgaagtcgtcaatcactacttcacaactcat > 8:247813‑M1/1‑32 (MQ=255) aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatg < 3:31400‑M1/149‑121 (MQ=255) aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga < 7:196301‑M1/147‑119 (MQ=255) aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga > 8:196301‑M1/1‑29 (MQ=255) aaaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatga < 2:103709‑M1/147‑119 (MQ=255) aaCTGTCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccataatatgtcaaagccaaaaaacccttttgaaaagcgccttgaagtcttgaatcactacttcacaactgatgaagg > 2:155298‑M1/1‑28 (MQ=255) tCCAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggtta > 5:15651‑M1/1‑23 (MQ=255) cAGGTTTTGGGGGTCAGTTCAgtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactac < 6:166964‑M1/125‑105 (MQ=255) aGGTTTTGGGTGTCAGTTCAgtatgtactgcacccattttgtttgacgatgaattggaatagcccctattatgtgaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatctctacttcacaactgatgatggttacagga < 8:306421‑M1/149‑130 (MQ=255) gtgtcAGTTCAgtatgtacgtcacccatttttttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaaggcgttaatcactacttcacacctgatgatgggtacaggatcatctcg < 3:309527‑M1/146‑138 (MQ=255) gggTCAGGTCAgtatgtactgcacccattttgttggacgatgaactggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcgg < 3:187315‑M1/149‑139 (MQ=255) gttcagtatgtaatgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaataccctttagaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctctgcacgtt < 1:75336‑M1/149‑145 (MQ=255) ttcagtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa < 8:274300‑M1/101‑98 (MQ=255) ttcagtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaa > 7:274300‑M1/1‑4 (MQ=255) cagtatgtactgcacccattttgttggacgatgaaatggaatagcccctaatatgtcaaagccaaaatacccttttgaaaagcgccttgaagtcgtgaatcactacttcacaactgatgatggttacaggatcatctcggcacgtttt < 5:246315‑M1/148‑147 (MQ=255) | GACGTAAGATGCGAAAAGCAGCCATGGACAGAAACTATCTGGCGTCAGTCCTTGCGGGGAGCGGGCTTTCGTAATCTTGCCCTGAATACAGGACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATG > NC_000913/3625441‑3625734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |