mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4160853 = | 175 (2.030) | 8 (0.090) | 8/428 | NT | 4.4% | intergenic (‑63/‑271) | sthA/fabR | pyridine nucleotide transhydrogenase, soluble/transcriptional repressor of fabA and fabB |
| ? | NC_000913 | = 4499511 | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | 3410546 = | 103 (1.190) | 3 (0.040) | 3/410 | NT | 2.4% | coding (267/966 nt) | dusB | tRNA‑dihydrouridine synthase B |
| ? | NC_000913 | 3410718 = | 143 (1.730) | coding (439/966 nt) | dusB | tRNA‑dihydrouridine synthase B | |||||
| * | ? | NC_000913 | 3216165 = | 131 (1.510) | 3 (0.040) | 3/410 | NT | 2.7% | coding (327/765 nt) | yqjH | putative siderophore interacting protein |
| ? | NC_000913 | 3216247 = | 95 (1.150) | coding (245/765 nt) | yqjH | putative siderophore interacting protein | |||||
| * | ? | NC_000913 | 2882234 = | 78 (0.900) | 3 (0.040) | 3/394 | NT | 4.2% | coding (404/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein |
| ? | NC_000913 | 2882252 = | 66 (0.830) | coding (386/483 nt) | casB | CRISP RNA (crRNA) containing Cascade antiviral complex protein | |||||
| * | ? | NC_000913 | = 2670137 | 103 (1.190) | 3 (0.040) | 3/416 | NT | 3.9% | coding (1106/1362 nt) | hcaE | 3‑phenylpropionate dioxygenase, large (alpha) subunit |
| ? | NC_000913 | = 2670349 | 50 (0.600) | coding (1318/1362 nt) | hcaE | 3‑phenylpropionate dioxygenase, large (alpha) subunit | |||||
| * | ? | NC_000913 | = 1536774 | 62 (0.710) | 3 (0.040) | 3/414 | NT | 4.2% | coding (536/696 nt) | narW | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) |
| ? | NC_000913 | = 1536833 | 78 (0.930) | coding (477/696 nt) | narW | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) | |||||
| * | ? | NC_000913 | = 1195193 | 94 (1.080) | 4 (0.050) | 4/430 | NT | 4.1% | coding (71/1251 nt) | icd | isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase |
| ? | NC_000913 | 1195197 = | 92 (1.060) | coding (75/1251 nt) | icd | isocitrate dehydrogenase; e14 prophage attachment site; tellurite reductase | |||||