BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP025533	1,778,276	221804 bp→TGTTTAAGTTTAGTGGATGG		CYL77_08500–CYL77_09540	212 genes CYL77_08500, CYL77_08505, CYL77_08510, CYL77_08515, CYL77_08520, CYL77_08525, CYL77_08530, CYL77_08535, CYL77_08540, CYL77_08545, CYL77_08550, CYL77_08555, CYL77_08560, CYL77_08565, CYL77_08570, CYL77_08575, CYL77_08580, CYL77_08585, CYL77_08590, CYL77_08595, CYL77_08600, CYL77_08605, CYL77_08610, CYL77_08615, CYL77_08620, CYL77_08625, CYL77_08630, CYL77_08635, CYL77_08640, CYL77_08645, CYL77_08650, CYL77_08655, CYL77_08660, CYL77_08665, CYL77_08670, CYL77_08675, CYL77_08680, CYL77_08685, CYL77_08690, CYL77_08695, CYL77_08700, CYL77_08705, CYL77_08710, CYL77_08715, CYL77_08720, CYL77_08725, CYL77_08730, CYL77_08735, CYL77_08740, CYL77_08745, CYL77_08750, CYL77_08755, CYL77_08760, CYL77_08765, CYL77_08770, CYL77_08775, CYL77_08775, CYL77_08780, CYL77_08780, CYL77_08785, CYL77_08790, CYL77_08795, CYL77_08800, CYL77_08805, CYL77_08810, CYL77_08815, CYL77_08820, CYL77_08825, CYL77_08830, CYL77_08835, CYL77_08840, CYL77_08845, CYL77_08850, CYL77_08855, CYL77_08860, CYL77_08865, CYL77_08870, CYL77_08875, CYL77_08880, CYL77_08885, CYL77_08890, CYL77_08895, CYL77_08900, CYL77_08905, CYL77_08910, CYL77_08915, CYL77_08920, CYL77_08925, CYL77_08930, CYL77_08935, CYL77_08940, CYL77_08945, CYL77_08950, CYL77_08955, CYL77_08960, CYL77_08965, CYL77_08970, CYL77_08975, CYL77_08980, CYL77_08985, CYL77_08990, CYL77_08995, CYL77_09000, CYL77_09005, CYL77_09010, CYL77_09015, CYL77_09020, CYL77_09025, CYL77_09030, CYL77_09035, CYL77_09040, CYL77_09045, CYL77_09050, CYL77_09055, CYL77_09060, CYL77_09065, CYL77_09070, CYL77_09075, CYL77_09080, CYL77_09085, CYL77_09090, CYL77_09095, CYL77_09100, CYL77_09105, CYL77_09110, CYL77_09115, CYL77_09120, CYL77_09125, CYL77_09130, CYL77_09135, CYL77_09140, CYL77_09145, CYL77_09150, CYL77_09155, CYL77_09160, CYL77_09165, CYL77_09170, CYL77_09175, CYL77_09180, CYL77_09185, CYL77_09190, CYL77_09195, CYL77_09200, CYL77_09205, CYL77_09210, CYL77_09215, CYL77_09220, CYL77_09225, CYL77_09230, CYL77_09235, CYL77_09240, CYL77_09245, CYL77_09245, CYL77_09250, CYL77_09255, CYL77_09260, CYL77_09265, CYL77_09270, CYL77_09275, CYL77_09280, CYL77_09285, CYL77_09290, CYL77_09295, CYL77_09300, CYL77_09305, CYL77_09310, CYL77_09315, CYL77_09320, CYL77_09325, CYL77_09330, CYL77_09335, CYL77_09340, CYL77_09345, CYL77_09350, CYL77_09355, CYL77_09360, CYL77_09365, CYL77_09370, CYL77_09375, CYL77_09380, CYL77_09385, CYL77_09390, CYL77_09395, CYL77_09400, CYL77_09405, CYL77_09410, CYL77_09415, CYL77_09420, CYL77_09425, CYL77_09430, CYL77_09435, CYL77_09440, CYL77_09445, CYL77_09450, CYL77_09455, CYL77_09460, CYL77_09465, CYL77_09470, CYL77_09475, CYL77_09480, CYL77_09485, CYL77_09490, CYL77_09495, CYL77_09500, CYL77_09505, CYL77_09510, CYL77_09515, CYL77_09520, CYL77_09525, CYL77_09530, CYL77_09535, CYL77_09540

Predicted mutation

evidence

seq id

position

mutation

annotation

gene

description

MC JC

CP025533

1,778,276

221804 bp→TGTTTAAGTTTAGTGGATGG

CYL77_08500–CYL77_09540

212 genes

CYL77_08500CYL77_08505CYL77_08510CYL77_08515CYL77_08520CYL77_08525CYL77_08530CYL77_08535CYL77_08540CYL77_08545CYL77_08550CYL77_08555CYL77_08560CYL77_08565CYL77_08570CYL77_08575CYL77_08580CYL77_08585CYL77_08590CYL77_08595CYL77_08600CYL77_08605CYL77_08610CYL77_08615CYL77_08620CYL77_08625CYL77_08630CYL77_08635CYL77_08640CYL77_08645CYL77_08650CYL77_08655CYL77_08660CYL77_08665CYL77_08670CYL77_08675CYL77_08680CYL77_08685CYL77_08690CYL77_08695CYL77_08700CYL77_08705CYL77_08710CYL77_08715CYL77_08720CYL77_08725CYL77_08730CYL77_08735CYL77_08740CYL77_08745CYL77_08750CYL77_08755CYL77_08760CYL77_08765CYL77_08770CYL77_08775CYL77_08775CYL77_08780CYL77_08780CYL77_08785CYL77_08790CYL77_08795CYL77_08800CYL77_08805CYL77_08810CYL77_08815CYL77_08820CYL77_08825CYL77_08830CYL77_08835CYL77_08840CYL77_08845CYL77_08850CYL77_08855CYL77_08860CYL77_08865CYL77_08870CYL77_08875CYL77_08880CYL77_08885CYL77_08890CYL77_08895CYL77_08900CYL77_08905CYL77_08910CYL77_08915CYL77_08920CYL77_08925CYL77_08930CYL77_08935CYL77_08940CYL77_08945CYL77_08950CYL77_08955CYL77_08960CYL77_08965CYL77_08970CYL77_08975CYL77_08980CYL77_08985CYL77_08990CYL77_08995CYL77_09000CYL77_09005CYL77_09010CYL77_09015CYL77_09020CYL77_09025CYL77_09030CYL77_09035CYL77_09040CYL77_09045CYL77_09050CYL77_09055CYL77_09060CYL77_09065CYL77_09070CYL77_09075CYL77_09080CYL77_09085CYL77_09090CYL77_09095CYL77_09100CYL77_09105CYL77_09110CYL77_09115CYL77_09120CYL77_09125CYL77_09130CYL77_09135CYL77_09140CYL77_09145CYL77_09150CYL77_09155CYL77_09160CYL77_09165CYL77_09170CYL77_09175CYL77_09180CYL77_09185CYL77_09190CYL77_09195CYL77_09200CYL77_09205CYL77_09210CYL77_09215CYL77_09220CYL77_09225CYL77_09230CYL77_09235CYL77_09240CYL77_09245CYL77_09245CYL77_09250CYL77_09255CYL77_09260CYL77_09265CYL77_09270CYL77_09275CYL77_09280CYL77_09285CYL77_09290CYL77_09295CYL77_09300CYL77_09305CYL77_09310CYL77_09315CYL77_09320CYL77_09325CYL77_09330CYL77_09335CYL77_09340CYL77_09345CYL77_09350CYL77_09355CYL77_09360CYL77_09365CYL77_09370CYL77_09375CYL77_09380CYL77_09385CYL77_09390CYL77_09395CYL77_09400CYL77_09405CYL77_09410CYL77_09415CYL77_09420CYL77_09425CYL77_09430CYL77_09435CYL77_09440CYL77_09445CYL77_09450CYL77_09455CYL77_09460CYL77_09465CYL77_09470CYL77_09475CYL77_09480CYL77_09485CYL77_09490CYL77_09495CYL77_09500CYL77_09505CYL77_09510CYL77_09515CYL77_09520CYL77_09525CYL77_09530CYL77_09535CYL77_09540

CYL77_08500, CYL77_08505, CYL77_08510, CYL77_08515, CYL77_08520, CYL77_08525, CYL77_08530, CYL77_08535, CYL77_08540, CYL77_08545, CYL77_08550, CYL77_08555, CYL77_08560, CYL77_08565, CYL77_08570, CYL77_08575, CYL77_08580, CYL77_08585, CYL77_08590, CYL77_08595, CYL77_08600, CYL77_08605, CYL77_08610, CYL77_08615, CYL77_08620, CYL77_08625, CYL77_08630, CYL77_08635, CYL77_08640, CYL77_08645, CYL77_08650, CYL77_08655, CYL77_08660, CYL77_08665, CYL77_08670, CYL77_08675, CYL77_08680, CYL77_08685, CYL77_08690, CYL77_08695, CYL77_08700, CYL77_08705, CYL77_08710, CYL77_08715, CYL77_08720, CYL77_08725, CYL77_08730, CYL77_08735, CYL77_08740, CYL77_08745, CYL77_08750, CYL77_08755, CYL77_08760, CYL77_08765, CYL77_08770, CYL77_08775, CYL77_08775, CYL77_08780, CYL77_08780, CYL77_08785, CYL77_08790, CYL77_08795, CYL77_08800, CYL77_08805, CYL77_08810, CYL77_08815, CYL77_08820, CYL77_08825, CYL77_08830, CYL77_08835, CYL77_08840, CYL77_08845, CYL77_08850, CYL77_08855, CYL77_08860, CYL77_08865, CYL77_08870, CYL77_08875, CYL77_08880, CYL77_08885, CYL77_08890, CYL77_08895, CYL77_08900, CYL77_08905, CYL77_08910, CYL77_08915, CYL77_08920, CYL77_08925, CYL77_08930, CYL77_08935, CYL77_08940, CYL77_08945, CYL77_08950, CYL77_08955, CYL77_08960, CYL77_08965, CYL77_08970, CYL77_08975, CYL77_08980, CYL77_08985, CYL77_08990, CYL77_08995, CYL77_09000, CYL77_09005, CYL77_09010, CYL77_09015, CYL77_09020, CYL77_09025, CYL77_09030, CYL77_09035, CYL77_09040, CYL77_09045, CYL77_09050, CYL77_09055, CYL77_09060, CYL77_09065, CYL77_09070, CYL77_09075, CYL77_09080, CYL77_09085, CYL77_09090, CYL77_09095, CYL77_09100, CYL77_09105, CYL77_09110, CYL77_09115, CYL77_09120, CYL77_09125, CYL77_09130, CYL77_09135, CYL77_09140, CYL77_09145, CYL77_09150, CYL77_09155, CYL77_09160, CYL77_09165, CYL77_09170, CYL77_09175, CYL77_09180, CYL77_09185, CYL77_09190, CYL77_09195, CYL77_09200, CYL77_09205, CYL77_09210, CYL77_09215, CYL77_09220, CYL77_09225, CYL77_09230, CYL77_09235, CYL77_09240, CYL77_09245, CYL77_09245, CYL77_09250, CYL77_09255, CYL77_09260, CYL77_09265, CYL77_09270, CYL77_09275, CYL77_09280, CYL77_09285, CYL77_09290, CYL77_09295, CYL77_09300, CYL77_09305, CYL77_09310, CYL77_09315, CYL77_09320, CYL77_09325, CYL77_09330, CYL77_09335, CYL77_09340, CYL77_09345, CYL77_09350, CYL77_09355, CYL77_09360, CYL77_09365, CYL77_09370, CYL77_09375, CYL77_09380, CYL77_09385, CYL77_09390, CYL77_09395, CYL77_09400, CYL77_09405, CYL77_09410, CYL77_09415, CYL77_09420, CYL77_09425, CYL77_09430, CYL77_09435, CYL77_09440, CYL77_09445, CYL77_09450, CYL77_09455, CYL77_09460, CYL77_09465, CYL77_09470, CYL77_09475, CYL77_09480, CYL77_09485, CYL77_09490, CYL77_09495, CYL77_09500, CYL77_09505, CYL77_09510, CYL77_09515, CYL77_09520, CYL77_09525, CYL77_09530, CYL77_09535, CYL77_09540

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP025533	1778276	2000079	221804	146 [0]	[0] 142	CYL77_08500–CYL77_09540	CYL77_08500,CYL77_08505,CYL77_08510,CYL77_08515,CYL77_08520,CYL77_08525,CYL77_08530,CYL77_08535,CYL77_08540,CYL77_08545,CYL77_08550,CYL77_08555,CYL77_08560,CYL77_08565,CYL77_08570,CYL77_08575,CYL77_08580,CYL77_08585,CYL77_08590,CYL77_08595,CYL77_08600,CYL77_08605,CYL77_08610,CYL77_08615,CYL77_08620,CYL77_08625,CYL77_08630,CYL77_08635,CYL77_08640,CYL77_08645,CYL77_08650,CYL77_08655,CYL77_08660,CYL77_08665,CYL77_08670,CYL77_08675,CYL77_08680,CYL77_08685,CYL77_08690,CYL77_08695,CYL77_08700,CYL77_08705,CYL77_08710,CYL77_08715,CYL77_08720,CYL77_08725,CYL77_08730,CYL77_08735,CYL77_08740,CYL77_08745,CYL77_08750,CYL77_08755,CYL77_08760,CYL77_08765,CYL77_08770,CYL77_08775,CYL77_08775,CYL77_08780,CYL77_08780,CYL77_08785,CYL77_08790,CYL77_08795,CYL77_08800,CYL77_08805,CYL77_08810,CYL77_08815,CYL77_08820,CYL77_08825,CYL77_08830,CYL77_08835,CYL77_08840,CYL77_08845,CYL77_08850,CYL77_08855,CYL77_08860,CYL77_08865,CYL77_08870,CYL77_08875,CYL77_08880,CYL77_08885,CYL77_08890,CYL77_08895,CYL77_08900,CYL77_08905,CYL77_08910,CYL77_08915,CYL77_08920,CYL77_08925,CYL77_08930,CYL77_08935,CYL77_08940,CYL77_08945,CYL77_08950,CYL77_08955,CYL77_08960,CYL77_08965,CYL77_08970,CYL77_08975,CYL77_08980,CYL77_08985,CYL77_08990,CYL77_08995,CYL77_09000,CYL77_09005,CYL77_09010,CYL77_09015,CYL77_09020,CYL77_09025,CYL77_09030,CYL77_09035,CYL77_09040,CYL77_09045,CYL77_09050,CYL77_09055,CYL77_09060,CYL77_09065,CYL77_09070,CYL77_09075,CYL77_09080,CYL77_09085,CYL77_09090,CYL77_09095,CYL77_09100,CYL77_09105,CYL77_09110,CYL77_09115,CYL77_09120,CYL77_09125,CYL77_09130,CYL77_09135,CYL77_09140,CYL77_09145,CYL77_09150,CYL77_09155,CYL77_09160,CYL77_09165,CYL77_09170,CYL77_09175,CYL77_09180,CYL77_09185,CYL77_09190,CYL77_09195,CYL77_09200,CYL77_09205,CYL77_09210,CYL77_09215,CYL77_09220,CYL77_09225,CYL77_09230,CYL77_09235,CYL77_09240,CYL77_09245,CYL77_09245,CYL77_09250,CYL77_09255,CYL77_09260,CYL77_09265,CYL77_09270,CYL77_09275,CYL77_09280,CYL77_09285,CYL77_09290,CYL77_09295,CYL77_09300,CYL77_09305,CYL77_09310,CYL77_09315,CYL77_09320,CYL77_09325,CYL77_09330,CYL77_09335,CYL77_09340,CYL77_09345,CYL77_09350,CYL77_09355,CYL77_09360,CYL77_09365,CYL77_09370,CYL77_09375,CYL77_09380,CYL77_09385,CYL77_09390,CYL77_09395,CYL77_09400,CYL77_09405,CYL77_09410,CYL77_09415,CYL77_09420,CYL77_09425,CYL77_09430,CYL77_09435,CYL77_09440,CYL77_09445,CYL77_09450,CYL77_09455,CYL77_09460,CYL77_09465,CYL77_09470,CYL77_09475,CYL77_09480,CYL77_09485,CYL77_09490,CYL77_09495,CYL77_09500,CYL77_09505,CYL77_09510,CYL77_09515,CYL77_09520,CYL77_09525,CYL77_09530,CYL77_09535,CYL77_09540

Missing coverage evidence...

seq id

start

end

size

←reads

reads→

gene

description

CP025533

1778276

2000079

221804

146 [0]

[0] 142

CYL77_08500–CYL77_09540

CYL77_08500,CYL77_08505,CYL77_08510,CYL77_08515,CYL77_08520,CYL77_08525,CYL77_08530,CYL77_08535,CYL77_08540,CYL77_08545,CYL77_08550,CYL77_08555,CYL77_08560,CYL77_08565,CYL77_08570,CYL77_08575,CYL77_08580,CYL77_08585,CYL77_08590,CYL77_08595,CYL77_08600,CYL77_08605,CYL77_08610,CYL77_08615,CYL77_08620,CYL77_08625,CYL77_08630,CYL77_08635,CYL77_08640,CYL77_08645,CYL77_08650,CYL77_08655,CYL77_08660,CYL77_08665,CYL77_08670,CYL77_08675,CYL77_08680,CYL77_08685,CYL77_08690,CYL77_08695,CYL77_08700,CYL77_08705,CYL77_08710,CYL77_08715,CYL77_08720,CYL77_08725,CYL77_08730,CYL77_08735,CYL77_08740,CYL77_08745,CYL77_08750,CYL77_08755,CYL77_08760,CYL77_08765,CYL77_08770,CYL77_08775,CYL77_08775,CYL77_08780,CYL77_08780,CYL77_08785,CYL77_08790,CYL77_08795,CYL77_08800,CYL77_08805,CYL77_08810,CYL77_08815,CYL77_08820,CYL77_08825,CYL77_08830,CYL77_08835,CYL77_08840,CYL77_08845,CYL77_08850,CYL77_08855,CYL77_08860,CYL77_08865,CYL77_08870,CYL77_08875,CYL77_08880,CYL77_08885,CYL77_08890,CYL77_08895,CYL77_08900,CYL77_08905,CYL77_08910,CYL77_08915,CYL77_08920,CYL77_08925,CYL77_08930,CYL77_08935,CYL77_08940,CYL77_08945,CYL77_08950,CYL77_08955,CYL77_08960,CYL77_08965,CYL77_08970,CYL77_08975,CYL77_08980,CYL77_08985,CYL77_08990,CYL77_08995,CYL77_09000,CYL77_09005,CYL77_09010,CYL77_09015,CYL77_09020,CYL77_09025,CYL77_09030,CYL77_09035,CYL77_09040,CYL77_09045,CYL77_09050,CYL77_09055,CYL77_09060,CYL77_09065,CYL77_09070,CYL77_09075,CYL77_09080,CYL77_09085,CYL77_09090,CYL77_09095,CYL77_09100,CYL77_09105,CYL77_09110,CYL77_09115,CYL77_09120,CYL77_09125,CYL77_09130,CYL77_09135,CYL77_09140,CYL77_09145,CYL77_09150,CYL77_09155,CYL77_09160,CYL77_09165,CYL77_09170,CYL77_09175,CYL77_09180,CYL77_09185,CYL77_09190,CYL77_09195,CYL77_09200,CYL77_09205,CYL77_09210,CYL77_09215,CYL77_09220,CYL77_09225,CYL77_09230,CYL77_09235,CYL77_09240,CYL77_09245,CYL77_09245,CYL77_09250,CYL77_09255,CYL77_09260,CYL77_09265,CYL77_09270,CYL77_09275,CYL77_09280,CYL77_09285,CYL77_09290,CYL77_09295,CYL77_09300,CYL77_09305,CYL77_09310,CYL77_09315,CYL77_09320,CYL77_09325,CYL77_09330,CYL77_09335,CYL77_09340,CYL77_09345,CYL77_09350,CYL77_09355,CYL77_09360,CYL77_09365,CYL77_09370,CYL77_09375,CYL77_09380,CYL77_09385,CYL77_09390,CYL77_09395,CYL77_09400,CYL77_09405,CYL77_09410,CYL77_09415,CYL77_09420,CYL77_09425,CYL77_09430,CYL77_09435,CYL77_09440,CYL77_09445,CYL77_09450,CYL77_09455,CYL77_09460,CYL77_09465,CYL77_09470,CYL77_09475,CYL77_09480,CYL77_09485,CYL77_09490,CYL77_09495,CYL77_09500,CYL77_09505,CYL77_09510,CYL77_09515,CYL77_09520,CYL77_09525,CYL77_09530,CYL77_09535,CYL77_09540

New junction evidence
	seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP025533	= 1778275	0 (0.000)	133 (1.090) +TGTTTAAGTTTAGTGGATGG	118/456	0.0	100%	intergenic (‑287/‑61)	CYL77_08495/CYL77_08500	tRNA‑Gly/tRNA‑Val
?	CP025533	2000080 =	0 (0.000)	intergenic (‑471/+15)	CYL77_09540/CYL77_09545	hypothetical protein/anion transporter

New junction evidence

seq id

position

reads (cov)

score

skew

freq

annotation

gene

product

CP025533

= 1778275

0 (0.000)

133 (1.090)
+TGTTTAAGTTTAGTGGATGG

118/456

0.0

100%

intergenic (‑287/‑61)

CYL77_08495/CYL77_08500

tRNA‑Gly/tRNA‑Val

CP025533

2000080 =

0 (0.000)

intergenic (‑471/+15)

CYL77_09540/CYL77_09545

hypothetical protein/anion transporter