| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 116634 = | 22 (0.820) | 6 (0.240) | 6/192 | 1.5 | 23.9% | coding (696/996 nt) | h16_A0102 | probable extra‑cytoplasmic solute receptor |
| ? | AM260479 | 116673 = | 18 (0.730) | coding (735/996 nt) | h16_A0102 | probable extra‑cytoplasmic solute receptor | |||||
CGATCTCCGGCGGCGTGCCGGCTTTCACAAAGATGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/116755‑116634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccgacCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGAC > AM260479/116673‑116802 CGATCTCCGGCGGCGTGCCGGCTTTCACAAAGATGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCG > 1:1148922/1‑115CGATCTCCGGCGGCGTGCCGGCTTTCACAAAGATGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCG < 2:1148922/115‑1 GGCTTTCACAAAGATGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTG > 1:1163568/1‑134 TCACAAAGATGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGACCATGGAGGAAACCGGGGTGGGCAAGCTCTTGTCGA < 2:1163568/133‑1 TGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGACCATGGAGGAAACCGGGGT > 1:913644/1‑107 TGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGACCATGGAGGAAACCGGGGT < 2:913644/107‑1 GTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGACCA < 1:640704/77‑1 GTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGACCA > 2:640704/1‑77 CCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGA > 1:484199/1‑134 CGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGAC < 1:1096936/134‑1 CGATCTCCGGCGGCGTGCCGGCTTTCACAAAGATGCCGATCCACGCCGTCGACAAGAGGTTGCCCACCCCGGTTTCCTCCATGGTCGGCACCTCGGGCAGGCTGGGGATTCGCCGTGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/116755‑116634‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgccgacCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGAC > AM260479/116673‑116802 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |