| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 116634 = | 22 (0.820) | 6 (0.240) | 6/192 | 1.5 | 23.9% | coding (696/996 nt) | h16_A0102 | probable extra‑cytoplasmic solute receptor |
| ? | AM260479 | 116673 = | 18 (0.730) | coding (735/996 nt) | h16_A0102 | probable extra‑cytoplasmic solute receptor | |||||
ACGTTCCCTATCGCGGTTCCACGCCGGCGACCACCGCGCTGCTGGCCGGTGAAACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTG > AM260479/116504‑116766 | gtccggggcgcgcaggaccgcgaccaggtgctcatgcagcctggctgcgatctccggcggcgtgccggctttcacaaagatgccgatccacgccgtcgacaagaggttgcccaccccggtttcctccatgGTCg < 1:1096936‑M1/4‑1 (MQ=255) tccggggcgcgcaggaccgcgaccaggtgctcatgcagcctggctgcgatctccggcggcgtgccggctttcacaaagatgccgatccacgccgtcgacaagaggttgcccaccccggtttcctccatgGTCgg > 1:484199‑M1/130‑134 (MQ=255) tCGCGGTTCCACGCCGGCGACCACCGCGCTGCTGGCCGGTGAAACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGaa < 1:561367/134‑1 (MQ=255) ttCCACGCCGGCGACCACCGCGCTGCTGGCCGGTGAAACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCa < 2:990621/134‑1 (MQ=255) gACCACCGCGCTGCTGGCCGGTGAAACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAgg < 1:62448/134‑1 (MQ=255) ccGCGCTGCTGGCCGGTGAAACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCg < 1:1176780/134‑1 (MQ=255) aCGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGt < 2:516444/134‑1 (MQ=255) aGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCAc < 2:95786/75‑1 (MQ=255) aGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCAc > 1:95786/1‑75 (MQ=255) aaCCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTggg > 1:1186673/1‑119 (MQ=255) aaCCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTggg < 2:1186673/119‑1 (MQ=255) aGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATc > 2:668354/1‑134 (MQ=255) cTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCg > 2:973635/1‑48 (MQ=255) cTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCg < 1:973635/48‑1 (MQ=255) gCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTtg > 2:413078/1‑134 (MQ=255) atatCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTtgt > 2:767965/1‑133 (MQ=255) atatCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTtgt > 2:1152753/1‑133 (MQ=255) tcgacaagagcttgcccaccccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGa < 2:1163568‑M1/98‑1 (MQ=255) caagaggttgcccaccccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGcc > 1:1163568‑M1/32‑134 (MQ=255) cAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCAcgc > 2:811017/1‑134 (MQ=255) gCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCa < 2:288704/62‑1 (MQ=255) gCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCa > 1:288704/1‑62 (MQ=255) accccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCa > 1:913644‑M1/19‑107 (MQ=255) accccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCa < 2:913644‑M1/89‑1 (MQ=255) cGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCGTCTTTGTGAAAGcc > 2:422657/1‑116 (MQ=255) cGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCGTCTTTGTGAAAGcc < 1:422657/116‑1 (MQ=255) ccGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGc > 2:1096936/1‑133 (MQ=255) tgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGAc > 2:640704‑M1/3‑77 (MQ=255) tgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGAc < 1:640704‑M1/75‑1 (MQ=255) cGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTg < 1:413078/134‑1 (MQ=255) | ACGTTCCCTATCGCGGTTCCACGCCGGCGACCACCGCGCTGCTGGCCGGTGAAACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTG > AM260479/116504‑116766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |