New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	116634 =	22 (0.820)	6 (0.240)	6/192	1.5	23.9%	coding (696/996 nt)	h16_A0102	probable extra‑cytoplasmic solute receptor
	?	AM260479	116673 =	18 (0.730)					coding (735/996 nt)	h16_A0102	probable extra‑cytoplasmic solute receptor

ACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGAC  >  AM260479/116557‑116802                                                                                                                     |                                                                                                                                  aCGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGt                                                                                                                  <  2:516444/134‑1 (MQ=255)              ggctttcacaaagatgccgatccacgccgtcgacaagaggttgcccaccccggtttcctccatggtcggcacctcgggcaggctggggattcgccgtgccgacCATGGAGGAAACCGGGGTGGGCAACCTCTTg                                                                                                     >  1:1163568‑M2/104‑134 (MQ=255)                   tcacaaagatgccgatccacgccgtcgacaagaggttgcccaccccggtttcctccatggtcggcacctcgggcaggctggggattcgccgtgccgacCATGGAGGAAACCGGGGTGGGCAAGCTCTTGTCGa                                                                                                 <  2:1163568‑M2/35‑1 (MQ=255)                   aaCCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTggg                                                                                                               >  1:1186673/1‑119 (MQ=255)                   aaCCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTggg                                                                                                               <  2:1186673/119‑1 (MQ=255)                            tgccgatccacgccgtcgacaagaggttgcccaccccggtttcctccatggtcggcacctcgggcaggctggggattcgccgtgccgacCATGGAGGAAACCGGGGt                                                                                                                  <  2:913644‑M2/18‑1 (MQ=255)                            tgccgatccacgccgtcgacaagaggttgcccaccccggtttcctccatggtcggcacctcgggcaggctggggattcgccgtgccgacCATGGAGGAAACCGGGGt                                                                                                                  >  1:913644‑M2/90‑107 (MQ=255)                             aGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATc                                                                                      >  2:668354/1‑134 (MQ=255)                                       gCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTtg                                                                            >  2:413078/1‑134 (MQ=255)                                         atatCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTtgt                                                                           >  2:1152753/1‑133 (MQ=255)                                         atatCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTtgt                                                                           >  2:767965/1‑133 (MQ=255)                                          gtcgacaagaggttgcccaccccggtttcctccatggtcggcacctcgggcaggctggggattcgccgtgccgacCa                                                                                                                                  <  1:640704‑M2/2‑1 (MQ=255)                                          gtcgacaagaggttgcccaccccggtttcctccatggtcggcacctcgggcaggctggggattcgccgtgccgacCa                                                                                                                                  >  2:640704‑M2/76‑77 (MQ=255)                                           tcgacaagagcttgcccaccccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGa                                                                         <  2:1163568‑M1/98‑1 (MQ=255)                                               caagaggttgcccaccccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGcc                                                                    >  1:1163568‑M1/32‑134 (MQ=255)                                                      cAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCAcgc                                                             >  2:811017/1‑134 (MQ=255)                                                         gCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCa                                                                                                                                  <  2:288704/62‑1 (MQ=255)                                                         gCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCa                                                                                                                                  >  1:288704/1‑62 (MQ=255)                                                            accccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCa                                                                                  >  1:913644‑M1/19‑107 (MQ=255)                                                            accccggtttcctccatgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCa                                                                                  <  2:913644‑M1/89‑1 (MQ=255)                                                                 cGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCGTCTTTGTGAAAGcc                                                                    <  1:422657/116‑1 (MQ=255)                                                                 cGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCGTCTTTGTGAAAGcc                                                                    >  2:422657/1‑116 (MQ=255)                                                                       ccGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGc                                             >  2:1096936/1‑133 (MQ=255)                                                                            tgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGAc                                                                                                <  1:640704‑M1/75‑1 (MQ=255)                                                                            tgGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGAc                                                                                                >  2:640704‑M1/3‑77 (MQ=255)                                                                             cGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTg                                      <  1:413078/134‑1 (MQ=255)                                                                                     CGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCg                                                 >  1:1148922‑M1/1‑115 (MQ=255)                                                                                     CGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCg                                                 <  2:1148922‑M1/115‑1 (MQ=255)                                                                                                          gAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGcc                                                                    >  2:761233/1‑75 (MQ=255)                                                                                                          gAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGcc                                                                    <  1:761233/75‑1 (MQ=255)                                                                                                           aGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGa                                 >  2:133502/1‑109 (MQ=255)                                                                                                           aGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGa                                 <  1:133502/109‑1 (MQ=255)                                                                                                                ccgacCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGa   >  1:484199‑M2/6‑134 (MQ=255)                                                                                                                 cgacCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGAc  <  1:1096936‑M2/130‑1 (MQ=255)                                                                                                                     |                                                                                                                                  ACGACTTTCCAGTTCGACAACCTGACCCAGGCCCTGCCGCATATCCGGGCCGGCAAGCTGCGCCCGCTCGCCGTGACGTCGGCACGGCGAATCCCCAGCCTGCCCGAGGTGCCGACCATGGAGGAAACCGGGGTGGGCAACCTCTTGTCGACGGCGTGGATCGGCATCTTTGTGAAAGCCGGCACGCCGCCGGAGATCGCAGCCAGGCTGCATGAGCACCTGGTCGCGGTCCTGCGCGCCCCGGAC  >  AM260479/116557‑116802

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.