| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 739439 = | 10 (0.370) | 6 (0.240) | 6/192 | 1.5 | 42.5% | coding (925/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase |
| ? | AM260479 | 739466 = | 7 (0.280) | coding (952/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase | |||||
GGTTGCGCGGATCCGGCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/739523‑739439‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcagGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGCGACGAAGCCGGGCTGGCAACGCCGCGGCAGGCGGCAGTGGCCT > AM260479/739466‑739598 GGTTGCGCGGATCCGGCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGCAGGCGCA < 1:305159/90‑1GGTTGCGCGGATCCGGCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGCAGGCGCA > 2:305159/1‑90 ATCCGGCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGCAGGC > 1:304857/1‑77 ATCCGGCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGCAGGC < 2:304857/77‑1 GCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGC > 2:645904/1‑68 GCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGC < 1:645904/68‑1 CTGCGGTGTAGAGCCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGC < 2:502777/65‑1 CTGCGGTGTAGAGCCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGC > 1:502777/1‑65 CGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGCGACGAAGCCGGGCTGGCAACGCCGC < 1:1070289/120‑1 CGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGCGACGAAGCCGGGCTGGCAACGCCGC > 2:1070289/1‑120 GCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGGGACGAAGCCGGGCTGGCAACGCCGCGGCAGGCGGCAGTGG < 2:1076769/134‑1 GCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCG < 2:1033383/55‑1 GCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCG > 1:35421/1‑55 GCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCG < 2:35421/55‑1 GCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCG > 1:1033383/1‑55 CAGGCGCACCGGGCGGGCAGGGCTGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGCGACGAAGCCGGGCTGGCAACGCCGCGGCAGGCGGCAGTGGC > 1:284377/1‑134 GGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGCGACGAAGCCGGGCTGGCAACGCCGCGGCAGGCGGCAGTGGCCT > 2:1088916/1‑134 GGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTG > 1:640202/1‑69 GGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTG < 2:640202/69‑1 GGTTGCGCGGATCCGGCGGCATCGCCACCAGCTCAACCGCCCTGCCCGCCCGGTGCGCCTGCGCTGCGGTGTAGAGCCAGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/739523‑739439‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcagGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTGGATGATGGCGCAGGCCGACGGCGACGAAGCCGGGCTGGCAACGCCGCGGCAGGCGGCAGTGGCCT > AM260479/739466‑739598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |