| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 739439 = | 10 (0.370) | 6 (0.240) | 6/192 | 1.5 | 42.5% | coding (925/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase |
| ? | AM260479 | 739466 = | 7 (0.280) | coding (952/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase | |||||
CCAGCAGTTGCCGGCCGACGCGCCGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTG > AM260479/739306‑739533 | aggccactgccgcctgccgcggcgttgccagcccggcttcgtcgccgtcggcctgcgccatcatccagccgtacaggttgcgcggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcc > 2:1088916‑M1/134‑134 (MQ=255) gccactgccgcctgccgcggcgttgccagcccggcttcgtcgccgtcggcctgcgccatcatccagccgtacaggttgcgcggatccggcggcatcgccaccagctcaacagccctgcccgcccggtgcgcCTg > 1:284377‑M1/132‑134 (MQ=255) ccactgccgcctgccgcggcgttgccagcccggcttcgtccccgtcggcctgcgccatcatccagccgtacaggttgcgcggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgc < 2:1076769‑M1/4‑1 (MQ=255) cagTTGCCGGCCGACGCGCCGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCgcgctgcg < 1:440992/134‑1 (MQ=255) gccgACGCGCCGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTa > 1:726783/1‑134 (MQ=255) gcggcgttgccagcccggcttcgtcgccgtcggcctgcgccatcatccagccgtacaggttgcgcggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgcg < 1:1070289‑M1/5‑1 (MQ=255) gcggcgttgccagcccggcttcgtcgccgtcggcctgcgccatcatccagccgtacaggttgcgcggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgcg > 2:1070289‑M1/116‑120 (MQ=255) ccGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACcgcagc < 2:726783/134‑1 (MQ=255) cGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGTGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCgcgct > 2:1078196/1‑112 (MQ=255) cGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCgcgct < 1:1078196/112‑1 (MQ=255) gcgcCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCtggt > 1:877502/1‑134 (MQ=255) gcCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCtggtgg < 2:877502/134‑1 (MQ=255) cagccgtacaggttgcgcggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcc > 1:640202‑M1/69‑69 (MQ=255) cagccgtacaggttgcgcggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcc < 2:640202‑M1/1‑1 (MQ=255) gcggcggACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATgccgc < 1:335048/130‑1 (MQ=255) gcggcggACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATgccgc > 2:335048/1‑130 (MQ=255) cggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgc > 1:1033383‑M1/52‑55 (MQ=255) cggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgc < 2:1033383‑M1/4‑1 (MQ=255) cggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgc > 1:35421‑M1/52‑55 (MQ=255) cggatccggcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTgc < 2:35421‑M1/4‑1 (MQ=255) gcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTGCGCTGGCTCTACACcgcag > 1:502777‑M1/44‑65 (MQ=255) gcggcatcgccaccagctcaaccgccctgcccgcccggtgcgcCTGCGCTGGCTCTACACcgcag < 2:502777‑M1/22‑1 (MQ=255) ttCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTg > 1:43516/1‑134 (MQ=255) tgcgcCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAAcc < 1:305159‑M1/85‑1 (MQ=255) tgcgcCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAAcc > 2:305159‑M1/6‑90 (MQ=255) gcCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGAt < 2:304857‑M1/75‑1 (MQ=255) gcCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGAt > 1:304857‑M1/3‑77 (MQ=255) | CCAGCAGTTGCCGGCCGACGCGCCGGTGACCGAGCTGTGGCAGGTGCTGGCCGGCCACGCGCCCGGCCGCGCGGCGGCGGACGAGGTGACCGTGTTCGATTCGGTTGGGTTTGCGCTGGAAGACTACGCCGCGCTGCGCTGGCTCTACACCGCAGCGCAGGCGCACCGGGCGGGCAGGGCGGTTGAGCTGGTGGCGATGCCGCCGGATCCGCGCAACCTGTACGGCTG > AM260479/739306‑739533 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |