| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 16 (0.870) | 13/208 | 0.4 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 20 (1.100) | 20/206 | 0.1 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
GCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AY305378/84699‑84817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGGGCCTTGCGCTTGGCGGC > AY305378/93025‑93158 GCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAA < 2:1042764/133‑1 TCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAG > 2:386545/1‑134 CTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGG > 1:286747/1‑134 ATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATC > 2:612468/1‑134 GACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAG > 1:554052/1‑132 ACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAG > 2:906405/1‑134 ACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGA < 2:209538/132‑1 CACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTC > 1:895075/1‑134 GCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGC < 2:286747/134‑1 TAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGAT < 2:895075/134‑1 CGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGG < 1:612468/134‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTG < 1:386545/134‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATC < 1:50167/92‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATC > 2:50167/1‑92 TCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTT < 2:191283/108‑1 TCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTT > 1:191283/1‑108 CTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTT < 2:554052/133‑1 CGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACAT > 2:400630/1‑133 AGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGA < 1:845001/101‑1 AGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGA > 2:845001/1‑101 GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGGGCCTTGCGCTTGGCGGC > 1:623939/1‑134 GCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AY305378/84699‑84817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGGGCCTTGCGCTTGGCGGC > AY305378/93025‑93158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |