| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 16 (0.870) | 13/208 | 0.4 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 20 (1.100) | 20/206 | 0.1 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
CGCCAACGTTTGTTCCATTCTCGTCGTGCGATTTTTCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAA > AY305378/92897‑93135 | cGCCAACGTTTGTTCCATTCTCGTCGTGCGATTTTTCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGct < 1:304748/132‑1 (MQ=255) aaCGTTTGTTCCATTCTCGTCGTGCGATTTTTCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTg < 1:729912/134‑1 (MQ=255) ccATTCTCGTCGTGCGATTTTTCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGctc > 2:571125/1‑119 (MQ=255) ccATTCTCGTCGTGCGATTTTTCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGctc < 1:571125/119‑1 (MQ=255) ttttCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCgg > 2:487176/1‑134 (MQ=255) gAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATc < 1:109351/134‑1 (MQ=255) gAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATc < 1:1106450/134‑1 (MQ=255) ccTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGAt > 2:99289/1‑132 (MQ=255) ccTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGAt > 2:921958/1‑132 (MQ=255) ctctTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGaaaa > 1:832818/1‑74 (MQ=255) ctctTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGaaaa < 2:832818/74‑1 (MQ=255) cGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGT‑GGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGa > 1:639929/1‑130 (MQ=255) cGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGT‑GGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGa < 2:639929/130‑1 (MQ=255) ggCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTg < 1:487176/134‑1 (MQ=255) gCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCgg > 2:1157225/1‑77 (MQ=255) gCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCgg < 1:1157225/77‑1 (MQ=255) gCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTgc > 1:53490/1‑134 (MQ=255) gCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTgc > 2:1001669/1‑134 (MQ=255) gCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTgc > 2:1001814/1‑134 (MQ=255) ttGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATgg < 2:1177790/133‑1 (MQ=255) gAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGttt < 1:99289/133‑1 (MQ=255) gAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGttt < 1:1001814/133‑1 (MQ=255) gCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAAt > 2:165686/1‑45 (MQ=255) gCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAAt < 1:165686/45‑1 (MQ=255) aaGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATaa < 1:921958/134‑1 (MQ=255) | CGCCAACGTTTGTTCCATTCTCGTCGTGCGATTTTTCCCGAAGGTGCCCTAAGGTTTATAACCGTCGCCTCTTAGGCGATCGGCCCATTTTGGAGCGTCGCATGGAAGACGGCATTGACGACAATTCCGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAA > AY305378/92897‑93135 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |