| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 2917085 | 16 (0.600) | 4 (0.170) | 3/188 | 2.2 | 20.8% | coding (379/1098 nt) | h16_A2701 | uncharacterized conserved protein |
| ? | AM260479 | 2917250 = | 16 (0.660) | coding (214/1098 nt) | h16_A2701 | uncharacterized conserved protein | |||||
CGACGACAGCGTCGCGCGCAGGAACTCTATGGAGATATCCAGCGCCACGTACTGCGCCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACT > AM260479/2916957‑2917216 | cgacgaCAGCGTCGCGCGCAGGAACTCTATGGAGATATCCAGCGCCACGTACTGCGCCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGc > 2:693664/1‑134 (MQ=255) cgacAGCGTCGCGCGCAGGAACTCTATGGAGATATCCAGCGCCACGTACTGCGCCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCgg > 1:1127967/1‑134 (MQ=255) gcgcCACGTACTGCGCCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCa > 1:339883/1‑128 (MQ=255) cgcCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTg < 2:339883/133‑1 (MQ=255) cgcCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTg < 2:1127967/133‑1 (MQ=255) ccGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCgg < 1:1046069/81‑1 (MQ=255) ccGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCgg > 2:1046069/1‑81 (MQ=255) cAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggctggggc > 1:692124‑M1/1‑66 (MQ=255) cAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggc > 1:1169889‑M1/1‑66 (MQ=255) cAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggc < 2:1169889‑M1/128‑63 (MQ=255) ttCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggctggggcggctgccggtgcgcgcggccattggc < 2:692124‑M1/133‑95 (MQ=255) aTTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCg > 1:666616/1‑118 (MQ=255) aTTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCg < 2:666616/118‑1 (MQ=255) ccAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGccc < 2:847530/134‑1 (MQ=255) aGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAg > 2:119111/1‑134 (MQ=255) ggTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGc < 1:119111/134‑1 (MQ=255) caccaGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAg > 2:871207/1‑117 (MQ=255) caccaGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAg < 1:871207/117‑1 (MQ=255) gCACGCAGCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggctggggcggctgccggtgcgcgcggccattgg < 2:1058277‑M1/103‑94 (MQ=255) gCACGCAGCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggctggggcggctgccggtgcgcgcggccattgg > 1:1058277‑M1/1‑10 (MQ=255) gCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGcgcg < 1:853240/117‑1 (MQ=255) gCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGcgcg > 2:853240/1‑117 (MQ=255) gCCcggccagcacctgctcgcgcagcgcgccgctgtcctcgcggtactgctgcacgaactccggctggggcggctgccggtgcgcgcggccattggccagcgcgaccagggcgggcggtgcggccgcatggccg < 1:693664‑M1/134‑132 (MQ=255) | CGACGACAGCGTCGCGCGCAGGAACTCTATGGAGATATCCAGCGCCACGTACTGCGCCGGGCGCAGGGTGCCAAAGAGCCTGGCAGCCTTTTCGCAATTGCCCGCACCCAGGTCCACCAGCACGCAGCCGCTGCCGGCACGCGCGGCGATGGCGGGCGCCGCGCTGGCAAAGATCGCGGCCTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACT > AM260479/2916957‑2917216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |