| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 2917085 | 16 (0.600) | 4 (0.170) | 3/188 | 2.2 | 20.8% | coding (379/1098 nt) | h16_A2701 | uncharacterized conserved protein |
| ? | AM260479 | 2917250 = | 16 (0.660) | coding (214/1098 nt) | h16_A2701 | uncharacterized conserved protein | |||||
CTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAGCGCGACCAGGGCGGGCGGTGCGGCCGCATGGCCG > AM260479/2917137‑2917380 | cTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTcgcg > 1:771754/1‑132 (MQ=255)cTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTcgcg > 1:517099/1‑132 (MQ=255) gggtAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTc < 2:221812/134‑1 (MQ=255) ggTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTg < 2:673015/116‑1 (MQ=255) ggTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTg > 1:673015/1‑116 (MQ=255) ggTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACg > 2:376564/1‑133 (MQ=255) gTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGccc < 2:733114/80‑1 (MQ=255) gTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGccc > 1:733114/1‑80 (MQ=255) tGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACg < 1:316741/131‑1 (MQ=255) tGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACg > 2:316741/1‑131 (MQ=255) cagggtgccaaagagcctggcagccttttcgcaattgcccgcacccaggtccaccagcacgcagccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGc < 2:1169889‑M2/62‑1 (MQ=255) cagggtgccaaagagcctggcagccttttcgcaattgcccgcacccaggtccaccagcacgcagccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGc > 1:1169889‑M2/67‑128 (MQ=255) cagggtgccaaagagcctggcagccttttcgcaattgcccgcacccaggtccaccagcacgcagccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGggc > 1:692124‑M2/67‑134 (MQ=255) ttcgcaattgcccgcacccaggtccaccagcacgcagccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGc < 2:692124‑M2/94‑1 (MQ=255) cTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAg > 1:339914/1‑50 (MQ=255) cTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAg < 2:339914/50‑1 (MQ=255) tGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTg > 1:1163426/1‑59 (MQ=255) tGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTg < 2:1163426/59‑1 (MQ=255) gcCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAGCGCGACCAGGgcgggcgg < 2:517099/134‑1 (MQ=255) cGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAGCGCGACCAGGGCGGGCGGTGCGGcc < 1:376564/134‑1 (MQ=255) gcacgcagccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTgg > 1:1058277‑M2/11‑103 (MQ=255) gcacgcagccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTgg < 2:1058277‑M2/93‑1 (MQ=255) gccCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAGCGCGACCAGGGCGGGCGGTGCGGCCGCATGGCCg < 1:693664‑M2/131‑1 (MQ=255) cGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAgcg > 1:709896/1‑99 (MQ=255) cGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAgcg < 2:709896/99‑1 (MQ=255) | CTCGGTGCGGGTCGGGTAGTACTCTGGCAGGTCGGTGATGGCTTCGAACAGGCGCGAGCCCAGCACGTCGTAGAAGAACTTGGGGCTGATGGCGGCCTGCCCGGCACGCAGCCCGGCCAGCACCTGCTCGCGCAGCGCGCCGCTGTCCTCGCGGTACTGCTGCACGAACTCCGGCTGGGGCGGCTGCCGGTGCGCGCGGCCATTGGCCAGCGCGACCAGGGCGGGCGGTGCGGCCGCATGGCCG > AM260479/2917137‑2917380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |