Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
MC JC | AM260479 | 1,714,344 | (CGAAGC)17→9 | coding (1338‑1385/3312 nt) | h16_A1582 → | DNA segregation ATPase FtsK/SpoIIIE related protein |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | AM260479 | 1714287 | 1714334 | 48 | 12 [0] | [0] 12 | h16_A1582 | DNA segregation ATPase FtsK/SpoIIIE related protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260479 | 1714335 = | 0 (0.000) | 12 (1.010) | 11/94 | 0.2 | 100% | coding (1329/3312 nt) | h16_A1582 | DNA segregation ATPase FtsK/SpoIIIE related protein |
? | AM260479 | = 1714286 | 0 (0.000) | coding (1280/3312 nt) | h16_A1582 | DNA segregation ATPase FtsK/SpoIIIE related protein |
GGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCGAGGAGCGGAGAT > AM260479/1714236‑1714404 | gggcattGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtca < 1:63383‑M2/131‑84 (MQ=255) ggCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacc < 1:28402‑M2/134‑94 (MQ=255) gCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagc < 1:484685‑M2/134‑100 (MQ=255) ccGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaa > 1:445021‑M2/1‑29 (MQ=255) ccGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaa < 2:445021‑M2/120‑92 (MQ=255) cACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagcc > 2:28402‑M2/1‑22 (MQ=255) gCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagccgtgcc < 2:1092195‑M2/134‑118 (MQ=255) cTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagccgtgccc > 1:1092195‑M2/1‑16 (MQ=255) ccGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagccgtgcc > 1:471622‑M2/1‑13 (MQ=255) ccGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagccgtgcc < 2:471622‑M2/130‑118 (MQ=255) gCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggag > 1:789401‑M2/1‑3 (MQ=255) gCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggag < 2:789401‑M2/71‑69 (MQ=255) | GGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCGAGGAGCGGAGAT > AM260479/1714236‑1714404 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |