| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 194714 = | 12 (0.390) | 6 (0.220) | 6/190 | 1.7 | 34.3% | intergenic (+16/+38) | h16_B0169/h16_B0170 | transcriptional regulator, LysR‑family/Hypothetical protein |
| ? | AM260480 | 194734 = | 12 (0.430) | intergenic (+36/+18) | h16_B0169/h16_B0170 | transcriptional regulator, LysR‑family/Hypothetical protein | |||||
TCCGAGCTGGAGCCCGAGGCGGGCCTGGACGGGGGGATGGGGGCGGAAGCAGCCGCGAGCGGGCAGGCTGAAGGAGCGGCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGAACGGATCGGCCTTGCCGGCGTGGG > AM260480/194603‑194867 | ttcctgggcggcgccaggctgggcaaggccgacccgttcactgacggcgccaggaccaccgaccgccgcgacgcattcaccgacggcgcctgagctcctgccctttccgttgccacggccccggccgtggcAAc > 2:5076‑M2/132‑134 (MQ=255) gCTGGAGCCCGAGGCGGGCCTGGACGGGGGGATGGGGGCGGAAGCAGCCGCGAGCGGGCAGGCTGAAGGAGCGGCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGa > 1:164385/1‑132 (MQ=255) ggcggcgccaggctgggcaaggccgacccgttcactgacggcgccaggaccaccgaccgccgcgacgcattcaccgacggcgcctgagctcctgccctttccgttgccacggccccggccgtggcAACGGAAAg < 1:5076‑M2/9‑1 (MQ=255) ctgggcaaggccgacccgttcactgacggcgccaggaccaccgaccgccgcgacgcattcaccgacggcgcctgagctcctgccctttccgttgccacggccccggccgtggcAACGGAAAGGGCAGGAGCTCa < 1:651207‑M2/21‑1 (MQ=255) gttcactgacggcgccaggaccaccgaccgccgcgacgcattcaccgacggcgcctgagctcctgccctttccgttgccacggccccggccgtggcAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATg > 2:1056605‑M2/97‑134 (MQ=255) ctgacggcgccaggaccgctgaccgccgcgacgcattcaccgacggcgccggagctcgcgcactttccgttgcaacggccccggctgtggcAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTcg < 1:740933‑M2/43‑1 (MQ=255) acggcgccaggaccaccgaccgccgcgacgcattcaccgacggcgcctgagctcctgccctttccgttgccacggccccggccgtggcAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCgcgg < 1:1056605‑M2/46‑1 (MQ=255) ggAAGCAGCCGCGAGCGGGCAGGCTGAAGGAGCGGCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCgcggc < 2:164385/134‑1 (MQ=255) ccgcgacgcattcaccgacggcgcctgagctcctgccctttccgttGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGt < 1:1056605‑M1/88‑1 (MQ=255) cgacgcattcaccgacggcgcctgagctcctgccctttccgttGCCACAGCCGGGGCCGTTGCAACGGAAAGTGCGCGAGCTCCGGCGCCGTCGGTGAATGCGTCGCGGCGGTCAGCGGTCCTGGCGCCGTCAg < 1:740933‑M1/91‑1 (MQ=255) cattcaccgacggcgcctgagctcctgccctttccgttGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAAc > 2:1056605‑M1/39‑134 (MQ=255) aGCGGCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAg < 2:744325/128‑1 (MQ=255) aGCGGCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAg > 1:744325/1‑128 (MQ=255) ggCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGt < 1:387726/134‑1 (MQ=255) ccGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCa > 2:482081/1‑72 (MQ=255) ccGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCa < 1:482081/72‑1 (MQ=255) tgagctcctgccctttccgttGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAg < 1:651207‑M1/113‑1 (MQ=255) aGGGCGCTGGCGGGCCGCCACGGCCCCGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTg < 1:102783/97‑1 (MQ=255) aGGGCGCTGGCGGGCCGCCACGGCCCCGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTg > 2:102783/1‑97 (MQ=255) gcgcTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGgcgc < 1:943091/134‑1 (MQ=255) ctttccgttGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCgccgcc < 1:5076‑M1/125‑1 (MQ=255) cGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTgg < 2:1021693/124‑1 (MQ=255) cGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTgg > 1:1021693/1‑124 (MQ=255) gttGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGaa > 2:5076‑M1/4‑134 (MQ=255) tggcAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGAACGGATCGGCCTTGCCGGCg < 2:740933‑M2/130‑1 (MQ=255) gcAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGAACGGATCGGCCTTGCCGGCGTg < 2:651207‑M2/132‑1 (MQ=255) gcAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGAACGGATCGGCATTGCCGGCGTg > 2:1018968‑M2/3‑134 (MQ=255) aaCGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGAACGGATCGGCCTTGCCGGCGTggg > 2:1089776/1‑134 (MQ=255) | TCCGAGCTGGAGCCCGAGGCGGGCCTGGACGGGGGGATGGGGGCGGAAGCAGCCGCGAGCGGGCAGGCTGAAGGAGCGGCCCGCACGGCGGGTTGAGGGCGCTGGCGGGCCGCCACGGCCGGGGCCGTGGCAACGGAAAGGGCAGGAGCTCAGGCGCCGTCGGTGAATGCGTCGCGGCGGTCGGTGGTCCTGGCGCCGTCAGTGAACGGGTCGGCCTTGCCCAGCCTGGCGCCGCCCAGGAACGGATCGGCCTTGCCGGCGTGGG > AM260480/194603‑194867 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |