New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 1465426	18 (0.680)	4 (0.170)	4/194	1.9	17.3%	coding (4779/4857 nt)	gudB	NAD‑specific glutamate dehydrogenase
	?	AM260479	= 1465451	22 (0.910)					coding (4754/4857 nt)	gudB	NAD‑specific glutamate dehydrogenase
Rejected: Frequency below/above cutoff threshold.

GACGATGCGGACCTCGACACGGACGCGGAAGCAGACGAATAAGCCTGGGCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/1465289‑1465426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgctggAACGCTTTACGCGCATGCTGGCCGACCAGCGCG  <  AM260479/1465451‑1465419                                                                                                                                                                             GACGATGCGGACCTCGACACGGACGCGGAAGCAGACGAATAAGCCTGGGCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCG                                       <  2:971377/134‑1                                                 GCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGAACGCTTTACGCGCATGCTGGCCGACCAG      <  1:914042/119‑1                                                 GCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGAACGCTTTACGCGCATGCTGGCCGACCAG      >  2:914042/1‑119                                                                                                     ACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGAACGCTTTACGCGCATGCTGGCCGACCAGCGCG  >  1:446566/1‑71                                                                                                     ACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGAACGCTTTACGCGCATGCTGGCCGACCAGCGCG  <  2:446566/71‑1                                                                                                                                                                             GACGATGCGGACCTCGACACGGACGCGGAAGCAGACGAATAAGCCTGGGCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/1465289‑1465426 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgctggAACGCTTTACGCGCATGCTGGCCGACCAGCGCG  <  AM260479/1465451‑1465419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.