New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 1465426	18 (0.680)	4 (0.170)	4/194	1.9	17.3%	coding (4779/4857 nt)	gudB	NAD‑specific glutamate dehydrogenase
	?	AM260479	= 1465451	22 (0.910)					coding (4754/4857 nt)	gudB	NAD‑specific glutamate dehydrogenase
Rejected: Frequency below/above cutoff threshold.

GCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAGCCGCCCCAGGTCTT  >  AM260479/1465341‑1465568                                                                                                               |                                                                                                                      gCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAg                                                                                                <  2:798932/134‑1 (MQ=255)     gcgcTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGcc                                                                                            <  2:797804/134‑1 (MQ=255)          aTGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCa                                                                                           >  1:1056701/1‑130 (MQ=255)          aTGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCa                                                                                           <  2:1056701/130‑1 (MQ=255)               cgTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGAt                                                                                  >  2:905473/1‑134 (MQ=255)                    cAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATg                                                                              <  1:905473/133‑1 (MQ=255)                           ccGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCggg                                                                      >  2:488963/1‑134 (MQ=255)                                     gcACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGt                                                            <  1:9782/134‑1 (MQ=255)                                                 acAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACcctcct                                                  <  1:774593/132‑1 (MQ=255)                                                 acAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACcctcct                                                  >  2:774593/1‑132 (MQ=255)                                                              ccccGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGa                                   >  2:629737/1‑134 (MQ=255)                                                                   cAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTc                              <  2:361908/134‑1 (MQ=255)                                                                       ccccGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGAc                                             <  2:686871/115‑1 (MQ=255)                                                                       ccccGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGAc                                             >  1:686871/1‑115 (MQ=255)                                                                               cgcgcTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgt                                                                                 <  2:446566‑M2/71‑39 (MQ=255)                                                                               cgcgcTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgt                                                                                 >  1:446566‑M2/1‑33 (MQ=255)                                                                                  gcTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAgc               <  1:629737/134‑1 (MQ=255)                                                                                   cTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgtcggtcgcggtgcgcgagatcggcatgctggaacgcgcatagcgctggccagc                             <  1:914042‑M2/119‑91 (MQ=255)                                                                                   cTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgtcggtcgcggtgcgcgagatcggcatgctggaacgcgcatagcgctggccagc                             >  2:914042‑M2/1‑29 (MQ=255)                                                                                       tCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGt                                                            <  2:79509/84‑1 (MQ=255)                                                                                       tCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGt                                                            >  1:79509/1‑84 (MQ=255)                                                                                               cATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAGCCGCCCCAGGTCtt  >  1:985650/1‑134 (MQ=255)                                                                                                  gcgcGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCa                                                         <  1:573143/76‑1 (MQ=255)                                                                                                  gcgcGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCa                                                         >  2:573143/1‑76 (MQ=255)                                                                                                    gcgTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCt                    >  2:279325/1‑111 (MQ=255)                                                                                                    gcgTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCt                    <  1:279325/111‑1 (MQ=255)                                                                                                               |                                                                                                                      GCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAGCCGCCCCAGGTCTT  >  AM260479/1465341‑1465568

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.