New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 1465426	18 (0.680)	4 (0.170)	4/194	1.9	17.3%	coding (4779/4857 nt)	gudB	NAD‑specific glutamate dehydrogenase
	?	AM260479	= 1465451	22 (0.910)					coding (4754/4857 nt)	gudB	NAD‑specific glutamate dehydrogenase
Rejected: Frequency below/above cutoff threshold.

CTCGACACGGACGCGGAAGCAGACGAATAAGCCTGGGCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAGC  >  AM260479/1465301‑1465555                                                                                                                              |                                                                                                                                  cTCGACACGGACGCGGAAGCAGACGAATAAGCCTGGGCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCGGCCCCCGAGGCGCGCTGGTCGGCCAg                                                                                                                           <  1:676051/134‑1 (MQ=255)                                     gCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGaacgctttacgcgcatgctggccgaccag                                                                                                      >  2:914042‑M1/1‑90 (MQ=255)                                     gCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGaacgctttacgcgcatgctggccgaccag                                                                                                      <  1:914042‑M1/119‑30 (MQ=255)                                         gCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAg                                                                                   <  2:798932/134‑1 (MQ=255)                                             gcgcTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGcc                                                                               <  2:797804/134‑1 (MQ=255)                                                  aTGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCa                                                                              >  1:1056701/1‑130 (MQ=255)                                                  aTGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCa                                                                              <  2:1056701/130‑1 (MQ=255)                                                       cgTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGAt                                                                     >  2:905473/1‑134 (MQ=255)                                                            cAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCa                                                                                                                            >  1:398396/1‑74 (MQ=255)                                                            cAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCa                                                                                                                            <  2:398396/74‑1 (MQ=255)                                                            cAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATg                                                                 <  1:905473/133‑1 (MQ=255)                                                                   ccGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCggg                                                         >  2:488963/1‑134 (MQ=255)                                                                             gcACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGt                                               <  1:9782/134‑1 (MQ=255)                                                                                         acAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGaacgctttacgcgcatgctggccgaccagcgcg                                                                                                  >  1:446566‑M1/1‑38 (MQ=255)                                                                                         acAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGaacgctttacgcgcatgctggccgaccagcgcg                                                                                                  <  2:446566‑M1/71‑34 (MQ=255)                                                                                         acAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACcctcct                                     <  1:774593/132‑1 (MQ=255)                                                                                         acAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACcctcct                                     >  2:774593/1‑132 (MQ=255)                                                                                                      ccccGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGa                      >  2:629737/1‑134 (MQ=255)                                                                                                           cAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTc                 <  2:361908/134‑1 (MQ=255)                                                                                                               ccccGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGAc                                <  2:686871/115‑1 (MQ=255)                                                                                                               ccccGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGAc                                >  1:686871/1‑115 (MQ=255)                                                                                                                       cgcgcTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgt                                                                    <  2:446566‑M2/71‑39 (MQ=255)                                                                                                                       cgcgcTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgt                                                                    >  1:446566‑M2/1‑33 (MQ=255)                                                                                                                          gcTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAgc  <  1:629737/134‑1 (MQ=255)                                                                                                                           cTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgtcggtcgcggtgcgcgagatcggcatgctggaacgcgcatagcgctggccagc                <  1:914042‑M2/119‑91 (MQ=255)                                                                                                                           cTGGTCGGCCAGCATGCGCGTAAAGCGTTccagcgcgcctcgggggctgcggggctgtcgatgctgtcggtcgcggtgcgcgagatcggcatgctggaacgcgcatagcgctggccagc                >  2:914042‑M2/1‑29 (MQ=255)                                                                                                                              |                                                                                                                                  CTCGACACGGACGCGGAAGCAGACGAATAAGCCTGGGCTGGCCAGCGCTATGCGCGTTCCAGCATGCCGATCTCGCGCACCGCGACCGACAGCATCGACAGCCCCGCAGCCCCCGAGGCGCGCTGGTCGGCCAGCATGCGCGTAAAGCGTTCCAGCGCGCCATGACGGCTGGAGCGCCAGGCATCGATCATGGCGTCGGGCGTATCCAGTTCACCCTCCTGTGACAGCACGCTGACGGTCAGTGCGCGCTTGAGC  >  AM260479/1465301‑1465555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.