| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 540111 | 42 (1.420) | 4 (0.160) | 4/182 | 2.0 | 10.0% | coding (1227/1293 nt) | h16_B0478 | 7‑Keto‑8‑aminopelargonate synthetase and relatedenzymes |
| ? | AM260480 | = 540095 | 36 (1.430) | coding (1243/1293 nt) | h16_B0478 | 7‑Keto‑8‑aminopelargonate synthetase and relatedenzymes | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCACGCATCGCGGGCGACGCCGGCAAGTGAGGTGCGGCCGTCTTCCGCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/539968‑540111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgggcccggcgcAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGCGGAAGACGGCCGCACCTCACTTGCCGGCGTCGCCCGCGATGCGT < AM260480/540095‑539970 CCACGCATCGCGGGCGACGCCGGCAAGTGAGGTGCGGCCGTCTTCCGCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCG > 1:1008641/1‑134 CATCGCGGGCGACGCCGGCAAGTGAGGTGCGGCCGTCTTCCGCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCC < 2:396809/134‑1 CATCGCGGGCGACGCCGGCAAGTGAGGTGCGGCCGTCTTCCGCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCC < 2:646317/134‑1 GGCCGTCTTCCGCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCC > 2:300385/1‑103 GCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCC > 1:339118/1‑92 CCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGA < 2:114952/132‑1 CCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGG > 1:424067/1‑134 TCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGG > 2:73128/1‑132 GCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGC < 2:424067/134‑1 GGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGCGGAAGACGGCCGCACCTCACTTGCCGGCGTCGCCCGCGATGC > 2:1008641/1‑134 GGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGCGGAAGACGGCC > 1:300385/1‑103 GGCCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGC > 2:339118/1‑92 CCCGGCGCAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGCGGAAGACGGCCGCACCTCACTTGCCGGCGTCGCCCGCGATGCGT < 1:667544/134‑1 CCACGCATCGCGGGCGACGCCGGCAAGTGAGGTGCGGCCGTCTTCCGCTTGCGCTACCTTTGCATCCATCTCCAGGACTACTCCTCGCGGGAGCCTGCCAGCGACCCGCTTGTGGGATTTTGAGACTTGCGCCGGGCCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/539968‑540111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccgggcccggcgcAAGTCTCAAAATCCCACAAGCGGGTCGCTGGCAGGCTCCCGCGAGGAGTAGTCCTGGAGATGGATGCAAAGGTAGCGCAAGCGGAAGACGGCCGCACCTCACTTGCCGGCGTCGCCCGCGATGCGT < AM260480/540095‑539970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |