| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 642122 | 27 (1.010) | 6 (0.240) | 6/198 | 1.5 | 18.8% | coding (433/1431 nt) | xseA | Exodeoxyribonuclease VII, large subunit |
| ? | AM260479 | = 642135 | 27 (1.100) | coding (446/1431 nt) | xseA | Exodeoxyribonuclease VII, large subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGGGCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTG > AM260479/642000‑642253 | aGGGCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAg > 1:882207/1‑134 (MQ=255) ggCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCt < 2:882207/134‑1 (MQ=255) tGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaa > 1:69340‑M2/1‑124 (MQ=255) gTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGcc > 1:11334/1‑134 (MQ=255) gTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGcc < 2:250711/134‑1 (MQ=255) aCCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAgc < 1:618858/133‑1 (MQ=255) tATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaaggcttcgtacaggttgcccagcccg > 1:1038909‑M2/1‑98 (MQ=255) ggCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcagga > 2:626200‑M2/1‑93 (MQ=255) ggCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcagga < 1:626200‑M2/102‑10 (MQ=255) cgcgGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc < 2:11334/134‑1 (MQ=255) gcggcgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc < 1:513084/133‑1 (MQ=255) gcggcgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc > 2:513084/1‑133 (MQ=255) gcggcgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCg > 1:184996/1‑134 (MQ=255) cgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGgcg > 1:797691/1‑133 (MQ=255) cgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGgcg > 1:414865/1‑133 (MQ=255) aGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcatt > 1:874179‑M2/1‑82 (MQ=255) aGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcatt < 2:874179‑M2/129‑48 (MQ=255) gAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGc > 1:946551/1‑64 (MQ=255) gAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGc < 2:946551/64‑1 (MQ=255) aaTGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCagcttttccttcaggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcattgcctccacgcccaactgcacct < 2:874179‑M1/129‑83 (MQ=255) aaTGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCagcttttccttcaggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcattgcctccacgcccaactgcacct > 1:874179‑M1/1‑47 (MQ=255) cgcCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTc > 1:558597/1‑134 (MQ=255) cgggcTGGGCAACCTGTACGAAGCCTTCCTGCGCCagcttttccttcaggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcattgcctccacgcccaactgcacctcgccgcgcgcctcata > 1:1038909‑M1/1‑35 (MQ=255) gggcTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAggc > 2:826920/1‑134 (MQ=255) tACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc < 2:1023198/77‑1 (MQ=255) tACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc > 1:1023198/1‑77 (MQ=255) ttCCTGCGCCagcttttccttcaggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcattgcctccacgcccaactgcacctcgccgcgcgcctcatacatggtgaccacggcgcgcacctcca > 1:69340‑M1/1‑10 (MQ=255) tCCTGCGCCagcttttccttcaggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcattgcctccacgcccaactgcacctcgccgcgcgcc > 2:626200‑M1/1‑9 (MQ=255) tCCTGCGCCagcttttccttcaggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcattgcctccacgcccaactgcacctcgccgcgcgcc < 1:626200‑M1/102‑94 (MQ=255) tCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGac > 1:182013/1‑133 (MQ=255) ccTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacca > 2:1028899/1‑134 (MQ=255) ccTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacc < 1:27938/133‑1 (MQ=255) gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGc < 2:834304/76‑1 (MQ=255) gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGc > 1:834304/1‑76 (MQ=255) gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAggcggcgg < 2:151595/110‑1 (MQ=255) gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAggcggcgg > 1:151595/1‑110 (MQ=255) gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacc > 1:767437/1‑130 (MQ=255) gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacc < 2:767437/130‑1 (MQ=255) gcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTg < 2:182013/134‑1 (MQ=255) | AGGGCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTG > AM260479/642000‑642253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |