New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 642122	27 (1.010)	6 (0.240)	6/198	1.5	18.8%	coding (433/1431 nt)	xseA	Exodeoxyribonuclease VII, large subunit
	?	AM260479	= 642135	27 (1.100)					coding (446/1431 nt)	xseA	Exodeoxyribonuclease VII, large subunit
Rejected: Frequency below/above cutoff threshold.

GGCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTGCGCCG  >  AM260479/642002‑642258                                                                                                                                      |                                                                                                                            ggCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCt                                                                                                                             <  2:882207/134‑1 (MQ=255)           tGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaa                                                                                                                   >  1:69340‑M2/1‑124 (MQ=255)                         gTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGcc                                                                                                     >  1:11334/1‑134 (MQ=255)                         gTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGcc                                                                                                     <  2:250711/134‑1 (MQ=255)                               aCCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAgc                                                                                                <  1:618858/133‑1 (MQ=255)                                     tATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaaggcttcgtacaggttgcccagcccg                                                                                          >  1:1038909‑M2/1‑98 (MQ=255)                                          ggCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcagga                                                                                                                    <  1:626200‑M2/102‑10 (MQ=255)                                          ggCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcagga                                                                                                                    >  2:626200‑M2/1‑93 (MQ=255)                                              cgcgGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc                                                                                <  2:11334/134‑1 (MQ=255)                                               gcggcgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc                                                                                <  1:513084/133‑1 (MQ=255)                                               gcggcgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc                                                                                >  2:513084/1‑133 (MQ=255)                                               gcggcgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCg                                                                               >  1:184996/1‑134 (MQ=255)                                                   cgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGgcg                                                                            >  1:414865/1‑133 (MQ=255)                                                   cgAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGgcg                                                                            >  1:797691/1‑133 (MQ=255)                                                     aGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcatt                                                                              <  2:874179‑M2/129‑48 (MQ=255)                                                     aGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTggcgcaggaaggcttcgtacaggttgcccagcccggcccggcgcatt                                                                              >  1:874179‑M2/1‑82 (MQ=255)                                                                               cgcCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTc                                               >  1:558597/1‑134 (MQ=255)                                                                                        gggcTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAggc                                      >  2:826920/1‑134 (MQ=255)                                                                                                       tACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc                                                                                <  2:1023198/77‑1 (MQ=255)                                                                                                       tACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGcc                                                                                >  1:1023198/1‑77 (MQ=255)                                                                                                                 tCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGac              >  1:182013/1‑133 (MQ=255)                                                                                                                  ccTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacca            >  2:1028899/1‑134 (MQ=255)                                                                                                                  ccTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacc             <  1:27938/133‑1 (MQ=255)                                                                                                                     gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGc                                                                   >  1:834304/1‑76 (MQ=255)                                                                                                                     gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGc                                                                   <  2:834304/76‑1 (MQ=255)                                                                                                                     gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAggcggcgg                                 <  2:151595/110‑1 (MQ=255)                                                                                                                     gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAggcggcgg                                 >  1:151595/1‑110 (MQ=255)                                                                                                                     gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacc             >  1:767437/1‑130 (MQ=255)                                                                                                                     gcgcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGacc             <  2:767437/130‑1 (MQ=255)                                                                                                                       gcCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTg       <  2:182013/134‑1 (MQ=255)                                                                                                                            aaGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTGCGcc   <  2:821629/133‑1 (MQ=255)                                                                                                                            aaGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTGCGCCg  >  1:821629/1‑134 (MQ=255)                                                                                                                            aaGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTGCGCCg  >  1:49340/1‑134 (MQ=255)                                                                                                                            aaGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTGCGCCg  >  1:296258/1‑134 (MQ=255)                                                                                                                                      |                                                                                                                            GGCGAAGCGGTGGAGGTGCGCGCCGTGGTCACCATGTATGAGGCGCGCGGCGAGGTGCAGTTGGGCGTGGAGGCAATGCGCCGGGCCGGGCTGGGCAACCTGTACGAAGCCTTCCTGCGCCTGAAGGAAAAGCTGGCGCAGGCGGGGCTGTTCGCGCCGGAGCGCAAGCGCCCGGTGCCGGCGCATCCTCGCACCATCGGCGTGGTCACCTCGCTGCAGGCGGCGGCGCTGCGCGATGTGCTGACCACCTTGCGCCG  >  AM260479/642002‑642258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.