| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 1033846 | 23 (0.860) | 4 (0.160) | 4/204 | 2.0 | 17.1% | coding (881/1563 nt) | h16_A0938 | ABC‑type transporter, ATPase component: CUT2 family |
| ? | AM260479 | 1033877 = | 17 (0.670) | coding (850/1563 nt) | h16_A0938 | ABC‑type transporter, ATPase component: CUT2 family | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCCGCGCGCCGGCGCTGGCGCGCATCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCATGCGCGCGCGGCAG > AM260479/1033720‑1033934 | cccGCGCGCCGGCGCTGGCGCGCATCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGcc < 1:671862/134‑1 (MQ=255) ccGCGCGCCGGCGCTGGCGCGCATCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCg > 2:977564/1‑134 (MQ=255) ccGGCGCTGGCGCGCATCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGc > 1:558640/1‑134 (MQ=255) gcgcgcATCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGAt < 2:558640/132‑1 (MQ=255) aTCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCgg < 1:977564/134‑1 (MQ=255) gAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGAtc < 1:355225/124‑1 (MQ=255) gAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGAtc > 2:355225/1‑124 (MQ=255) ccggccgACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGa < 1:411112/134‑1 (MQ=255) cTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGG < 2:763232‑M1/90‑1 (MQ=255) cTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGG > 1:763232‑M1/1‑90 (MQ=255) gCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCga < 1:487921/133‑1 (MQ=255) tGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGcgtggacatccagcgagatcctgctcagctcggtcgcgaaggcatgcgcgcgcggcagcga > 1:175446‑M1/1‑73 (MQ=255) cATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGc > 2:561944/1‑119 (MQ=255) cATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGc < 1:561944/119‑1 (MQ=255) cTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCATgc > 1:220968/1‑134 (MQ=255) tgtCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGcgtggacatccagcgagatcctgctcagctcggtcgcgaaggcatgcgcgcgcggcagcgacaggccctgcacgctgagccgcac < 2:175446‑M1/133‑86 (MQ=255) tCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCATGCGCGCGCGGCAg < 2:220968/134‑1 (MQ=255) ttCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCga < 2:480161/90‑1 (MQ=255) ttCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCga > 1:480161/1‑90 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGcgtggacatccagcgagatcctgc < 1:665716‑M1/52‑25 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGcgtggacatccagcgagatcctgc > 2:665716‑M1/1‑28 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGa > 2:30201/1‑64 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGa < 1:30201/64‑1 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCa > 2:558200/1‑102 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCa < 1:558200/102‑1 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCATgcg > 1:68416/1‑106 (MQ=255) gCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCATgcg < 2:68416/106‑1 (MQ=255) cagcTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACAt < 1:776836/62‑1 (MQ=255) cagcTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACAt > 2:776836/1‑62 (MQ=255) | CCCGCGCGCCGGCGCTGGCGCGCATCGAGCCGGCCGACTGGCTTGCCGCCGAGCTGCACCGACATGTTGTCTGCGCGTGTGTCTTCACCGGACAGCGCGGCCAGCAGCTCCTGCTGCCCGTTGCCGGACACGCCGGCAATGCCGACGATCTCGCCGGCGTGGACATCCAGCGAGATCCTGCTCAGCTCGGTCGCGAAGGCATGCGCGCGCGGCAG > AM260479/1033720‑1033934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |