| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 2297609 = | 19 (0.710) | 4 (0.160) | 4/200 | 2.0 | 16.1% | coding (130/681 nt) | h16_A2111 | Ribosomal‑protein‑alanine acetyltransferase |
| ? | AM260479 | 2297698 = | 24 (0.960) | coding (41/681 nt) | h16_A2111 | Ribosomal‑protein‑alanine acetyltransferase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGCCAACGCATCGCTTTCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAGCCCGTCGATCTTC > AM260479/2297585‑2297817 | cGGCCAACGCATCGCTTTCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGtctc > 2:837567/1‑133 (MQ=255)cGGCCAACGCATCGCTTTCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGtctc > 2:821677/1‑133 (MQ=255) gCATCGCTTTCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGAt < 1:821677/134‑1 (MQ=255) aTCGCTTTCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGc < 2:1166/134‑1 (MQ=255) tCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCcgtcg < 2:1017149/132‑1 (MQ=255) AGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAgg > 1:290083‑M1/1‑93 (MQ=255) AGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAgg < 2:290083‑M1/93‑1 (MQ=255) gcgcgaggcggactatgcgccgtttgccgcgctcaatgccgacgcgcaggtgatgcgctatttccctgcgccgctggcgcAGCCGCAGGCGTTCGGTCTCGAAGGCGATGc > 1:371093‑M2/81‑111 (MQ=255) gcgcgaggcggactatgcgccgtttgccgcgctcaatgccgacgcgcaggtgatgcgctatttccctgcgccgctggcgcAGCCGCAGGCGTTCGGTCTCGAAGGCGATGc < 2:371093‑M2/31‑1 (MQ=255) gcgaggcggactatgcgccgtttgccgcgctcaatgccgacgcgcaggtgatgcgctatttccctgcgccgctggcgcAGCCGCAGGCGTTCGGTCTCGAAg > 1:439217‑M2/79‑102 (MQ=255) gcgaggcggactatgcgccgtttgccgcgctcaatgccgacgcgcaggtgatgcgctatttccctgcgccgctggcgcAGCCGCAGGCGTTCGGTCTCGAAg < 2:439217‑M2/24‑1 (MQ=255) gggAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGgcg > 2:558795/1‑134 (MQ=255) aGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCgg > 1:168175/1‑134 (MQ=255) gcATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTc > 1:1047045/1‑133 (MQ=255) aCCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGc > 1:316066/1‑134 (MQ=255) cTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGa < 1:561966/112‑1 (MQ=255) cTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGa > 2:561966/1‑112 (MQ=255) aTTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGtt > 2:744420/1‑134 (MQ=255) ttGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTc > 2:810027/1‑134 (MQ=255) aGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCAc < 1:744420/134‑1 (MQ=255) aaCGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCAc > 1:558646/1‑134 (MQ=255) gcATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAg < 2:168175/134‑1 (MQ=255) tAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAGccc < 1:837567/134‑1 (MQ=255) tCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAGCCCGTc < 2:558646/134‑1 (MQ=255) cGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAGCCCGTCGa < 2:770592/134‑1 (MQ=255) tCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCAt < 2:653762/56‑1 (MQ=255) tCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCAt > 1:653762/1‑56 (MQ=255) cgcgCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGc < 2:143770/40‑1 (MQ=255) cgcgCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGc > 1:143770/1‑40 (MQ=255) cgcgCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAGCCCGTCGAtcttc > 2:761296/1‑134 (MQ=255) | CGGCCAACGCATCGCTTTCAACACGCGCCAGCGGCGCAGGGAAATAGCGCATCACCTGCGCGTCGGCATTGAGCGCGGCAAACGGCGCATAGTCCGCCTCGCGCCACTGGCGCAGCCGCAGGCGTTCGGTCTCGAAGGCGATGCCGTCGTCCATGGCTCAGTCCAGATGGCGCACGCGGTCGATGGCCTGCTCGATGCGTTCCACCGCGATCACTTCGAGCCCGTCGATCTTC > AM260479/2297585‑2297817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |