| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 3596842 | 9 (0.360) | 4 (0.170) | 4/188 | 1.8 | 31.6% | coding (128/279 nt) | acyP | Acylphosphatase |
| ? | AM260479 | = 3596844 | 9 (0.390) | coding (126/279 nt) | acyP | Acylphosphatase | |||||
GCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/3596767‑3596842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgacggCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTCG < AM260479/3596844‑3596741 GCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAG < 1:870010/113‑1GCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAG > 2:870010/1‑113 GTGCGCCATCACCTCGACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTCG < 1:481867/124‑1 GTGCGCCATCACCTCGACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTCG > 2:481867/1‑124 GACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTCG < 1:365779/109‑1 GACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTCG > 2:365779/1‑109 GACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTC < 1:949877/108‑1 GACGGCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTC > 2:949877/1‑108 GCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260479/3596767‑3596842‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcgacggCACCGTCGAGGTGATGGCGCACGGCACGGTCAGGCAGCTCGAAGCCCTGCAGGCGTGGATGGAACAGGGCCCGCCGGCCGCGCAGGTGACGCTGGTCGAGGTCG < AM260479/3596844‑3596741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |