New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260479 | = 3596842 | 9 (0.360) | 4 (0.170) | 4/188 | 1.8 | 31.6% | coding (128/279 nt) | acyP | Acylphosphatase |
? | AM260479 | = 3596844 | 9 (0.390) | coding (126/279 nt) | acyP | Acylphosphatase |
CCCCAGGCCCGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGTAGCCCACGCCCTGCACGCGCCCATGCGCGACCAGGCGCCAGGT > AM260479/3596732‑3596957 | ccccAGGCCCGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCAc < 2:38306/133‑1 (MQ=255) cGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtcgaggtgatggcgcac > 2:481867‑M2/1‑104 (MQ=255) cGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtcgaggtgatggcgcac < 1:481867‑M2/124‑21 (MQ=255) cGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtc < 1:365779‑M2/109‑6 (MQ=255) cGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtc > 2:365779‑M2/1‑104 (MQ=255) gACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtc > 2:949877‑M2/1‑103 (MQ=255) gACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtc < 1:949877‑M2/108‑6 (MQ=255) gccggcGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGcaccgtcgaggtgatggcgcacggcacggtcaggcag < 1:870010‑M1/113‑38 (MQ=255) gccggcGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGcaccgtcgaggtgatggcgcacggcacggtcaggcag > 2:870010‑M1/1‑76 (MQ=255) gcggGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAg < 2:39963/134‑1 (MQ=255) ttCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGt < 1:1026030/134‑1 (MQ=255) aCGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGTAGCCCACg > 2:760596/1‑134 (MQ=255) gggCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGTAGCCCACGCCCTGCAcg < 2:37839/134‑1 (MQ=255) gCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAgc < 1:579633/63‑1 (MQ=255) gCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAgc > 2:579633/1‑63 (MQ=255) cTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggc < 1:870010‑M2/113‑77 (MQ=255) cTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggc > 2:870010‑M2/1‑37 (MQ=255) gtgcGCCATCACCTCGACGGcaccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggccgcgcaggtgacgctggtcgaggtcg > 2:481867‑M1/1‑20 (MQ=255) gtgcGCCATCACCTCGACGGcaccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggccgcgcaggtgacgctggtcgaggtcg < 1:481867‑M1/124‑105 (MQ=255) ccATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGTAGCCCACGCCCTGCACGCGCCCATGCGCGACCAGGCGCCAGGt < 2:580732/130‑1 (MQ=255) ccATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGTAGCCCACGCCCTGCACGCGCCCATGCGCGACCAGGCGCCAGGt > 1:580732/1‑130 (MQ=255) gACGGcaccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggccgcgcaggtgacgctggtcgaggtcg < 1:365779‑M1/109‑105 (MQ=255) gACGGcaccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggccgcgcaggtgacgctggtcgaggtcg > 2:365779‑M1/1‑5 (MQ=255) gACGGcaccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggccgcgcaggtgacgctggtcgaggtc > 2:949877‑M1/1‑5 (MQ=255) gACGGcaccgtcgaggtgatggcgcacggcacggtcaggcagctcgaagccctgcaggcgtggatggaacagggcccgccggccgcgcaggtgacgctggtcgaggtc < 1:949877‑M1/108‑104 (MQ=255) | CCCCAGGCCCGACCTCGACCAGCGTCACCTGCGCGGCCGGCGGGCCCTGTTCCATCCACGCCTGCAGGGCTTCGAGCTGCCTGACCGTGCCGTGCGCCATCACCTCGACGGTGCCGTCGAGCCGGTTGCGCACCCAGCCGCCAAGCTCAAGGTCGTCCGCCGCGTCGGCGCAGGCGGCGCGGTAGCCCACGCCCTGCACGCGCCCATGCGCGACCAGGCGCCAGGT > AM260479/3596732‑3596957 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |