| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 2899943 | 15 (0.680) | 3 (0.150) | 3/186 | 1.8 | 20.2% | coding (553/1281 nt) | h16_B2569 | Putative MFS transporter |
| ? | AM260480 | = 2899965 | 10 (0.500) | coding (531/1281 nt) | h16_B2569 | Putative MFS transporter | |||||
GGCAAACACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/2899812‑2899943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccggcAATTGGTGGCTTTGCCTACGTGGCCGGGCCGGGCGTGGTCTACGGGCTGAGTGCCACGCTCTTTGCCATTGCCGCCGTGCTGGTCAGCGGCATCACGC < AM260480/2899965‑2899868 GGCAAACACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGG < 1:165880/126‑1GGCAAACACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGG > 2:165880/1‑126 TCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCC < 1:764131/92‑1 TCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCC > 2:764131/1‑92 CCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCAATTGGTGGCTTTGCCTACGTGGC > 1:411333/1‑85 CCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCAATTGGTGGCTTTGCCTACGTGGC < 2:411333/85‑1 CGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCAATTGGTGGCTTTGCCTACGTGGCCGGGCCGGGCGTGGTCTACGGGCTGAGTGCCACGCTCTTTGCCATTGCCGCCGTGCTGGTCAGCGGCATCACGC > 2:653580/1‑134 GCCCGGCAATTGGTGGCTTTGCCTACGTGGCCGGG > 1:858920/1‑35 GCCCGGCAATTGGTGGCTTTGCCTACGTGGCCGGG < 2:858920/35‑1 CCGGCAATTGGTGGCTTTGCCTACGTGGCCGGGCCGGGCGTGGTCTACGGGCTGAGTGCCACGCTCTTTGCCATTGCCGCCGTGCTGGTCAGCGGCAT < 1:442695/98‑1 CCGGCAATTGGTGGCTTTGCCTACGTGGCCGGGCCGGGCGTGGTCTACGGGCTGAGTGCCACGCTCTTTGCCATTGCCGCCGTGCTGGTCAGCGGCAT > 2:442695/1‑98 GGCAAACACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/2899812‑2899943‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccggcAATTGGTGGCTTTGCCTACGTGGCCGGGCCGGGCGTGGTCTACGGGCTGAGTGCCACGCTCTTTGCCATTGCCGCCGTGCTGGTCAGCGGCATCACGC < AM260480/2899965‑2899868 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |