New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2899943	15 (0.680)	3 (0.150)	3/186	1.8	20.2%	coding (553/1281 nt)	h16_B2569	Putative MFS transporter
	?	AM260480	= 2899965	10 (0.500)					coding (531/1281 nt)	h16_B2569	Putative MFS transporter

AAACACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGGCGCGGCGTCACCACGCTGGGCAGCAGCGCCTGCAGCG  >  AM260480/2899815‑2900068                                                                                                                                 |                                                                                                                              aaaCACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGt                                                                                                                          <  2:1015989/134‑1 (MQ=255)             cACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTa                                                                                                                         >  2:946018/1‑123 (MQ=255)             cACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTa                                                                                                                         <  1:946018/123‑1 (MQ=255)                                  gcgcTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGc                                                                                                                 <  2:968631/110‑1 (MQ=255)                                  gcgcTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGc                                                                                                                 >  1:968631/1‑110 (MQ=255)                                            gCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGccacca                                                                                                            <  1:1055983/105‑1 (MQ=255)                                            gCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGccacca                                                                                                            >  2:1055983/1‑105 (MQ=255)                                                      gCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTgccgggccgggcgtggtctacgggctgagtgccacg                                                                     >  2:653580‑M2/1‑98 (MQ=255)                                                           aTGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTgccgg                                                                                                    <  1:442695‑M2/98‑6 (MQ=255)                                                           aTGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTgccgg                                                                                                    >  2:442695‑M2/1‑93 (MQ=255)                                                                     ccAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCaattggtggctttgcctacgtggc                                                                                                       >  1:411333‑M1/1‑61 (MQ=255)                                                                     ccAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCaattggtggctttgcctacgtggc                                                                                                       <  2:411333‑M1/85‑25 (MQ=255)                                                                                  aaTGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCt                                         >  2:252955/1‑134 (MQ=255)                                                                                      gCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGgc                                      <  1:252955/133‑1 (MQ=255)                                                                                              cGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCaattggtggctttgcctacgtggccgggccgggcgtggtctacgggctgagtgccacgctctttgccattgccgccgtgctggtcagcggcatcacgc                             >  2:653580‑M1/1‑36 (MQ=255)                                                                                                              tAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGGCGCGGCGTCACCACGCTGGGcagcag             >  1:836736/1‑134 (MQ=255)                                                                                                                        ccggcccggcCACGTAGGCAAAGCCACCAATTGCCGGGCCgatgat                                                                                           <  2:341985/46‑1 (MQ=255)                                                                                                                        ccggcccggcCACGTAGGCAAAGCCACCAATTGCCGGGCCgatgat                                                                                           >  1:341985/1‑46 (MQ=255)                                                                                                                        ccggcccggcCACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGGCGCGGCGTCACCACGCTGGGCAGCAGCGCCTGCAGc   >  2:786316/1‑134 (MQ=255)                                                                                                                         cggcccggccACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGGCGCGGCGTCACCACGCTGGGCAGCAGCGCCTGCAGCg  <  1:786316/134‑1 (MQ=255)                                                                                                                         cggcccggccACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGGCGCGGCGTCACCACGCTGGGCAGCAGCGCCTGCAGCg  >  1:249111/1‑134 (MQ=255)                                                                                                                           gcccggcaattggtggctttgcctacgtggccggg                                                                                                   >  1:858920‑M1/1‑7 (MQ=255)                                                                                                                           gcccggcaattggtggctttgcctacgtggccggg                                                                                                   <  2:858920‑M1/35‑29 (MQ=255)                                                                                                                            cccggccACGTAGGCAAAGCCACCAATTgccgggc                                                                                                  >  1:858920‑M2/1‑28 (MQ=255)                                                                                                                            cccggccACGTAGGCAAAGCCACCAATTgccgggc                                                                                                  <  2:858920‑M2/35‑8 (MQ=255)                                                                                                                             ccggcaattggtggctttgcctacgtggccgggccgggcgtggtctacgggctgagtgccacgctctttgccattgccgccgtgctggtcagcggcat                                  >  2:442695‑M1/1‑5 (MQ=255)                                                                                                                             ccggcaattggtggctttgcctacgtggccgggccgggcgtggtctacgggctgagtgccacgctctttgccattgccgccgtgctggtcagcggcat                                  <  1:442695‑M1/98‑94 (MQ=255)                                                                                                                                gccACGTAGGCAAAGCCACCAATTgccgggccgggcgtggtctacgggctgagtgccacgctctttgccattgccgccgtgctgg                                            >  1:411333‑M2/1‑24 (MQ=255)                                                                                                                                gccACGTAGGCAAAGCCACCAATTgccgggccgggcgtggtctacgggctgagtgccacgctctttgccattgccgccgtgctgg                                            <  2:411333‑M2/85‑62 (MQ=255)                                                                                                                                 |                                                                                                                              AAACACGGTGCGCACGCTGACCGGCGCGGTCAGGCGCTGCGCGGCCTGGCGCAGCGTGATGCCGCTGACCAGCACGGCGGCAATGGCAAAGAGCGTGGCACTCAGCCCGTAGACCACGCCCGGCCCGGCCACGTAGGCAAAGCCACCAATTGCCGGGCCGATGATGATGGCGGCCTGCCCGGCGGAGCTGGCCAGCGCCACCGCGCGCGGCAGCTGGCGCGGCGTCACCACGCTGGGCAGCAGCGCCTGCAGCG  >  AM260480/2899815‑2900068

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.